STRINGSTRING
RCOM_1206680 RCOM_1206680 RCOM_0471200 RCOM_0471200 RCOM_0198920 RCOM_0198920 RCOM_1031890 RCOM_1031890 RCOM_1080830 RCOM_1080830 RCOM_0366280 RCOM_0366280 RCOM_0984900 RCOM_0984900 RCOM_0960400 RCOM_0960400 RCOM_1526050 RCOM_1526050 RCOM_0775800 RCOM_0775800 RCOM_1691140 RCOM_1691140
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_1206680Zinc finger protein, putative. (338 aa)    
Predicted Functional Partners:
RCOM_0471200
Vegetative cell wall protein gp1, putative.
   
 0.605
RCOM_0198920
DNA binding protein, putative.
  
 
   0.507
RCOM_1031890
Transcriptional factor TINY, putative.
  
     0.477
RCOM_1080830
Uncharacterized protein.
  
     0.469
RCOM_0366280
Uncharacterized protein.
  
 
  0.461
RCOM_0984900
MADS-box domain-containing protein.
  
 
   0.450
RCOM_0960400
AP2/ERF domain-containing protein.
  
     0.447
RCOM_1526050
DNA binding protein, putative.
  
 
 0.443
RCOM_0775800
HTH myb-type domain-containing protein.
  
  0.432
RCOM_1691140
Zinc_ribbon_12 domain-containing protein.
  
 
  0.425
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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