STRINGSTRING
RCOM_0409800 RCOM_0409800 RCOM_0111710 RCOM_0111710 RCOM_0363740 RCOM_0363740 RCOM_0894640 RCOM_0894640 RCOM_1465160 RCOM_1465160 RCOM_1288930 RCOM_1288930 RCOM_0173590 RCOM_0173590 RCOM_0775800 RCOM_0775800 RCOM_0793640 RCOM_0793640 PALM1 PALM1 RCOM_0839150 RCOM_0839150
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0409800Zinc finger protein, putative. (345 aa)    
Predicted Functional Partners:
RCOM_0111710
Transcription factor, putative.
  
   
 0.498
RCOM_0363740
Uncharacterized protein.
  
     0.497
RCOM_0894640
Uncharacterized protein.
  
     0.465
RCOM_1465160
Ocs element-binding factor, putative.
  
     0.447
RCOM_1288930
Chloroplast-targeted copper chaperone, putative.
  
     0.443
RCOM_0173590
Zinc finger protein, putative.
  
   
 0.443
RCOM_0775800
HTH myb-type domain-containing protein.
  
     0.442
RCOM_0793640
AP2/ERF domain-containing protein.
  
     0.440
PALM1
Palmate-like pentafoliata 1 transcription factor.
  
     0.435
RCOM_0839150
AP2/ERF domain-containing protein.
  
     0.434
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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