STRINGSTRING
RCOM_0176920 RCOM_0176920 RCOM_0436110 RCOM_0436110 RCOM_0707670 RCOM_0707670 RCOM_0558560 RCOM_0558560 RCOM_1164350 RCOM_1164350 RCOM_0565330 RCOM_0565330 RCOM_0819830 RCOM_0819830 RCOM_0814320 RCOM_0814320
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0176920R2r3-myb transcription factor, putative. (301 aa)    
Predicted Functional Partners:
RCOM_0436110
WD-repeat protein, putative.
   
  
 0.531
RCOM_0707670
GTP-binding protein (P) alpha subunit, gpa1, putative.
      
 0.524
RCOM_0558560
BHLH domain-containing protein.
      
 0.505
RCOM_1164350
Cinnamate 4-hydroxylase, putative; Belongs to the cytochrome P450 family.
      
 0.424
RCOM_0565330
NAC domain-containing protein 21/22, putative.
      
 0.407
RCOM_0819830
DNA binding protein, putative.
      
 0.405
RCOM_0814320
Nucleic acid binding protein, putative; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
      
 0.404
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.