Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C1N185_MICPC | C1N4S4_MICPC | C1N185 | C1N4S4 | Predicted protein. | ATP-dependent DNA helicase. | 0.991 |
C1N185_MICPC | MRE11 | C1N185 | C1N6S7 | Predicted protein. | Mre11 DNA repair/recombination protein. | 0.998 |
C1N185_MICPC | RAD50 | C1N185 | C1MJY0 | Predicted protein. | Rad50 DNA repair/recombination protein. | 0.994 |
C1N185_MICPC | SDP1 | C1N185 | C1ML23 | Predicted protein. | SANT domain DNA-binding protein 1. | 0.502 |
C1N2D8_MICPC | SDP1 | C1N2D8 | C1ML23 | Cold-shock protein. | SANT domain DNA-binding protein 1. | 0.452 |
C1N4S4_MICPC | C1N185_MICPC | C1N4S4 | C1N185 | ATP-dependent DNA helicase. | Predicted protein. | 0.991 |
C1N4S4_MICPC | MRE11 | C1N4S4 | C1N6S7 | ATP-dependent DNA helicase. | Mre11 DNA repair/recombination protein. | 0.998 |
C1N4S4_MICPC | RAD50 | C1N4S4 | C1MJY0 | ATP-dependent DNA helicase. | Rad50 DNA repair/recombination protein. | 0.994 |
C1N4S4_MICPC | SDP1 | C1N4S4 | C1ML23 | ATP-dependent DNA helicase. | SANT domain DNA-binding protein 1. | 0.502 |
MRE11 | C1N185_MICPC | C1N6S7 | C1N185 | Mre11 DNA repair/recombination protein. | Predicted protein. | 0.998 |
MRE11 | C1N4S4_MICPC | C1N6S7 | C1N4S4 | Mre11 DNA repair/recombination protein. | ATP-dependent DNA helicase. | 0.998 |
MRE11 | RAD50 | C1N6S7 | C1MJY0 | Mre11 DNA repair/recombination protein. | Rad50 DNA repair/recombination protein. | 0.999 |
MRE11 | SDP1 | C1N6S7 | C1ML23 | Mre11 DNA repair/recombination protein. | SANT domain DNA-binding protein 1. | 0.418 |
RAD50 | C1N185_MICPC | C1MJY0 | C1N185 | Rad50 DNA repair/recombination protein. | Predicted protein. | 0.994 |
RAD50 | C1N4S4_MICPC | C1MJY0 | C1N4S4 | Rad50 DNA repair/recombination protein. | ATP-dependent DNA helicase. | 0.994 |
RAD50 | MRE11 | C1MJY0 | C1N6S7 | Rad50 DNA repair/recombination protein. | Mre11 DNA repair/recombination protein. | 0.999 |
RAD50 | SDP1 | C1MJY0 | C1ML23 | Rad50 DNA repair/recombination protein. | SANT domain DNA-binding protein 1. | 0.465 |
SDP1 | C1N185_MICPC | C1ML23 | C1N185 | SANT domain DNA-binding protein 1. | Predicted protein. | 0.502 |
SDP1 | C1N2D8_MICPC | C1ML23 | C1N2D8 | SANT domain DNA-binding protein 1. | Cold-shock protein. | 0.452 |
SDP1 | C1N4S4_MICPC | C1ML23 | C1N4S4 | SANT domain DNA-binding protein 1. | ATP-dependent DNA helicase. | 0.502 |
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