STRINGSTRING
Csa_1G032410 Csa_1G032410 Csa_3G509430 Csa_3G509430 Csa_3G045200 Csa_3G045200 Csa_6G487780 Csa_6G487780 Csa_7G291690 Csa_7G291690 Csa_3G045100 Csa_3G045100 Csa_7G276180 Csa_7G276180 Csa_1G000580 Csa_1G000580 Csa_2G315390 Csa_2G315390 Csa_4G638520 Csa_4G638520 Csa_5G167140 Csa_5G167140
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_1G032410NAC domain-containing protein. (248 aa)    
Predicted Functional Partners:
Csa_3G509430
C2H2-type domain-containing protein.
      
 0.539
Csa_3G045200
HTH myb-type domain-containing protein.
  
     0.512
Csa_6G487780
Uncharacterized protein.
  
     0.505
Csa_7G291690
Inhibitor I9 domain-containing protein.
  
     0.493
Csa_3G045100
Inhibitor I9 domain-containing protein.
  
     0.493
Csa_7G276180
Inhibitor I9 domain-containing protein.
  
     0.489
Csa_1G000580
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.487
Csa_2G315390
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.475
Csa_4G638520
Uncharacterized protein.
  
     0.472
Csa_5G167140
Phytocyanin domain-containing protein.
  
     0.470
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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