Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Csa_1G000580 | Csa_1G032410 | A0A0A0LR27 | A0A0A0LVE2 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC domain-containing protein. | 0.487 |
Csa_1G000580 | Csa_5G167140 | A0A0A0LR27 | A0A0A0KPG5 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Phytocyanin domain-containing protein. | 0.430 |
Csa_1G032410 | Csa_1G000580 | A0A0A0LVE2 | A0A0A0LR27 | NAC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.487 |
Csa_1G032410 | Csa_2G315390 | A0A0A0LVE2 | A0A0A0LJV3 | NAC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.475 |
Csa_1G032410 | Csa_3G045100 | A0A0A0LVE2 | A0A0A0L7D6 | NAC domain-containing protein. | Inhibitor I9 domain-containing protein. | 0.493 |
Csa_1G032410 | Csa_3G045200 | A0A0A0LVE2 | A0A0A0L7E4 | NAC domain-containing protein. | HTH myb-type domain-containing protein. | 0.512 |
Csa_1G032410 | Csa_3G509430 | A0A0A0LVE2 | A0A0A0LDF1 | NAC domain-containing protein. | C2H2-type domain-containing protein. | 0.539 |
Csa_1G032410 | Csa_4G638520 | A0A0A0LVE2 | A0A0A0L3H7 | NAC domain-containing protein. | Uncharacterized protein. | 0.472 |
Csa_1G032410 | Csa_5G167140 | A0A0A0LVE2 | A0A0A0KPG5 | NAC domain-containing protein. | Phytocyanin domain-containing protein. | 0.470 |
Csa_1G032410 | Csa_6G487780 | A0A0A0LVE2 | A0A0A0KJA8 | NAC domain-containing protein. | Uncharacterized protein. | 0.505 |
Csa_1G032410 | Csa_7G276180 | A0A0A0LVE2 | A0A0A0K993 | NAC domain-containing protein. | Inhibitor I9 domain-containing protein. | 0.489 |
Csa_1G032410 | Csa_7G291690 | A0A0A0LVE2 | A0A0A0K6B0 | NAC domain-containing protein. | Inhibitor I9 domain-containing protein. | 0.493 |
Csa_2G315390 | Csa_1G032410 | A0A0A0LJV3 | A0A0A0LVE2 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC domain-containing protein. | 0.475 |
Csa_3G045100 | Csa_1G032410 | A0A0A0L7D6 | A0A0A0LVE2 | Inhibitor I9 domain-containing protein. | NAC domain-containing protein. | 0.493 |
Csa_3G045100 | Csa_3G045200 | A0A0A0L7D6 | A0A0A0L7E4 | Inhibitor I9 domain-containing protein. | HTH myb-type domain-containing protein. | 0.441 |
Csa_3G045100 | Csa_4G638520 | A0A0A0L7D6 | A0A0A0L3H7 | Inhibitor I9 domain-containing protein. | Uncharacterized protein. | 0.479 |
Csa_3G045100 | Csa_5G167140 | A0A0A0L7D6 | A0A0A0KPG5 | Inhibitor I9 domain-containing protein. | Phytocyanin domain-containing protein. | 0.512 |
Csa_3G045100 | Csa_6G487780 | A0A0A0L7D6 | A0A0A0KJA8 | Inhibitor I9 domain-containing protein. | Uncharacterized protein. | 0.512 |
Csa_3G045100 | Csa_7G276180 | A0A0A0L7D6 | A0A0A0K993 | Inhibitor I9 domain-containing protein. | Inhibitor I9 domain-containing protein. | 0.479 |
Csa_3G045200 | Csa_1G032410 | A0A0A0L7E4 | A0A0A0LVE2 | HTH myb-type domain-containing protein. | NAC domain-containing protein. | 0.512 |
page 1 of 3