STRINGSTRING
Csa_4G629480 Csa_4G629480 Csa_6G524670 Csa_6G524670 Csa_1G536820 Csa_1G536820 Csa_3G039300 Csa_3G039300 Csa_5G264285 Csa_5G264285 Csa_3G776850 Csa_3G776850 Csa_7G453500 Csa_7G453500 Csa_3G122310 Csa_3G122310 Csa_3G733980 Csa_3G733980 Csa_7G009040 Csa_7G009040 Csa_6G430140 Csa_6G430140
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csa_4G629480NAC domain-containing protein. (359 aa)    
Predicted Functional Partners:
Csa_6G524670
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.500
Csa_1G536820
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.492
Csa_3G039300
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.485
Csa_5G264285
Remorin_C domain-containing protein.
  
     0.484
Csa_3G776850
Uncharacterized protein.
  
 
  0.479
Csa_7G453500
Phytocyanin domain-containing protein.
  
  
  0.476
Csa_3G122310
Uncharacterized protein.
  
     0.476
Csa_3G733980
C2H2-type domain-containing protein.
  
   
 0.471
Csa_7G009040
Uncharacterized protein.
  
     0.461
Csa_6G430140
F-box domain-containing protein.
  
     0.461
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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