NAC01 protein (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NAC01

NAC domain-containing protein 104. (201 aa)

Predicted Functional Partners:

NAC51

0.628

HSFB3

0.600

LOC101512115

0.563

LOC101515721

0.534

LOC101502704

0.534

LOC101514186

0.532

HSFA6A

0.531

LOC101509647

0.524

LOC101513453

0.523

LOC101493143

0.521

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HSFA6A	NAC01	A0A1S3E1Y1	A0A1S2X9E3	Heat stress transcription factor A-6b.	NAC domain-containing protein 104.	0.531
HSFB3	NAC01	A0A1S2XRP2	A0A1S2X9E3	LOW QUALITY PROTEIN: heat stress transcription factor B-3.	NAC domain-containing protein 104.	0.600
LOC101493143	LOC101502704	A0A1S2XLL8	A0A1S2YTY0	Uncharacterized protein LOC101493143.	Uncharacterized protein LOC101502704.	0.509
LOC101493143	LOC101509647	A0A1S2XLL8	A0A1S2XCV8	Uncharacterized protein LOC101493143.	F-box protein At5g46170-like.	0.456
LOC101493143	LOC101513453	A0A1S2XLL8	A0A1S2Z0X8	Uncharacterized protein LOC101493143.	Senescence/dehydration-associated protein At4g35985, chloroplastic-like.	0.482
LOC101493143	LOC101514186	A0A1S2XLL8	A0A1S2XD76	Uncharacterized protein LOC101493143.	Uncharacterized protein LOC101514186.	0.435
LOC101493143	LOC101515721	A0A1S2XLL8	A0A1S2XK52	Uncharacterized protein LOC101493143.	Uncharacterized protein LOC101515721.	0.494
LOC101493143	NAC01	A0A1S2XLL8	A0A1S2X9E3	Uncharacterized protein LOC101493143.	NAC domain-containing protein 104.	0.521
LOC101502704	LOC101493143	A0A1S2YTY0	A0A1S2XLL8	Uncharacterized protein LOC101502704.	Uncharacterized protein LOC101493143.	0.509
LOC101502704	LOC101509647	A0A1S2YTY0	A0A1S2XCV8	Uncharacterized protein LOC101502704.	F-box protein At5g46170-like.	0.487
LOC101502704	LOC101513453	A0A1S2YTY0	A0A1S2Z0X8	Uncharacterized protein LOC101502704.	Senescence/dehydration-associated protein At4g35985, chloroplastic-like.	0.503
LOC101502704	LOC101514186	A0A1S2YTY0	A0A1S2XD76	Uncharacterized protein LOC101502704.	Uncharacterized protein LOC101514186.	0.401
LOC101502704	NAC01	A0A1S2YTY0	A0A1S2X9E3	Uncharacterized protein LOC101502704.	NAC domain-containing protein 104.	0.534
LOC101502704	NAC51	A0A1S2YTY0	A0A1S2YI07	Uncharacterized protein LOC101502704.	NAC domain-containing protein 10.	0.407
LOC101509647	LOC101493143	A0A1S2XCV8	A0A1S2XLL8	F-box protein At5g46170-like.	Uncharacterized protein LOC101493143.	0.456
LOC101509647	LOC101502704	A0A1S2XCV8	A0A1S2YTY0	F-box protein At5g46170-like.	Uncharacterized protein LOC101502704.	0.487
LOC101509647	LOC101513453	A0A1S2XCV8	A0A1S2Z0X8	F-box protein At5g46170-like.	Senescence/dehydration-associated protein At4g35985, chloroplastic-like.	0.426
LOC101509647	LOC101514186	A0A1S2XCV8	A0A1S2XD76	F-box protein At5g46170-like.	Uncharacterized protein LOC101514186.	0.445
LOC101509647	LOC101515721	A0A1S2XCV8	A0A1S2XK52	F-box protein At5g46170-like.	Uncharacterized protein LOC101515721.	0.487
LOC101509647	NAC01	A0A1S2XCV8	A0A1S2X9E3	F-box protein At5g46170-like.	NAC domain-containing protein 104.	0.524