Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAARF8 | LOC101489097 | A0A1S2XKQ4 | A0A1S2Y7Z8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | O-fucosyltransferase 16. | 0.460 |
CAARF8 | LOC101496918 | A0A1S2XKQ4 | A0A1S2XIG3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | GEM-like protein 2 isoform X1. | 0.451 |
CAARF8 | LOC101497029 | A0A1S2XKQ4 | A0A1S2XML7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Protein ROOT HAIR SPECIFIC 17. | 0.443 |
CAARF8 | LOC101498725 | A0A1S2XKQ4 | A0A1S2XW48 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Zinc-finger homeodomain protein 4-like. | 0.513 |
CAARF8 | LOC105852523 | A0A1S2XKQ4 | A0A1S3EG21 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein LOC105852523. | 0.536 |
LOC101489097 | CAARF8 | A0A1S2Y7Z8 | A0A1S2XKQ4 | O-fucosyltransferase 16. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.460 |
LOC101489097 | LOC101496544 | A0A1S2Y7Z8 | A0A1S2Y6E3 | O-fucosyltransferase 16. | Uncharacterized protein LOC101496544 isoform X1. | 0.476 |
LOC101489097 | LOC101498725 | A0A1S2Y7Z8 | A0A1S2XW48 | O-fucosyltransferase 16. | Zinc-finger homeodomain protein 4-like. | 0.498 |
LOC101489097 | LOC101499577 | A0A1S2Y7Z8 | A0A1S2Y1N3 | O-fucosyltransferase 16. | LOB domain-containing protein 42. | 0.452 |
LOC101489097 | LOC101510131 | A0A1S2Y7Z8 | A0A1S2Z3H3 | O-fucosyltransferase 16. | Uncharacterized protein LOC101510131. | 0.530 |
LOC101489097 | LOC101514968 | A0A1S2Y7Z8 | A0A1S2XKI3 | O-fucosyltransferase 16. | LOB domain-containing protein 15 isoform X1. | 0.523 |
LOC101489097 | LOC105852523 | A0A1S2Y7Z8 | A0A1S3EG21 | O-fucosyltransferase 16. | Uncharacterized protein LOC105852523. | 0.488 |
LOC101489097 | LOC113786972 | A0A1S2Y7Z8 | A0A3Q7XBT5 | O-fucosyltransferase 16. | Glucan endo-1,3-beta-D-glucosidase-like. | 0.500 |
LOC101496544 | LOC101489097 | A0A1S2Y6E3 | A0A1S2Y7Z8 | Uncharacterized protein LOC101496544 isoform X1. | O-fucosyltransferase 16. | 0.476 |
LOC101496544 | LOC101497029 | A0A1S2Y6E3 | A0A1S2XML7 | Uncharacterized protein LOC101496544 isoform X1. | Protein ROOT HAIR SPECIFIC 17. | 0.477 |
LOC101496544 | LOC101498725 | A0A1S2Y6E3 | A0A1S2XW48 | Uncharacterized protein LOC101496544 isoform X1. | Zinc-finger homeodomain protein 4-like. | 0.494 |
LOC101496544 | LOC101510131 | A0A1S2Y6E3 | A0A1S2Z3H3 | Uncharacterized protein LOC101496544 isoform X1. | Uncharacterized protein LOC101510131. | 0.452 |
LOC101496544 | LOC101514968 | A0A1S2Y6E3 | A0A1S2XKI3 | Uncharacterized protein LOC101496544 isoform X1. | LOB domain-containing protein 15 isoform X1. | 0.458 |
LOC101496918 | CAARF8 | A0A1S2XIG3 | A0A1S2XKQ4 | GEM-like protein 2 isoform X1. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.451 |
LOC101496918 | LOC101497029 | A0A1S2XIG3 | A0A1S2XML7 | GEM-like protein 2 isoform X1. | Protein ROOT HAIR SPECIFIC 17. | 0.481 |
page 1 of 4