Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF3 | LOC101503964 | A0A1S2XCU0 | A0A1S2YD91 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | DELLA protein GAI; Belongs to the GRAS family. | 0.622 |
ARF3 | LOC101507839 | A0A1S2XCU0 | A0A1S2YGR6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | DELLA protein GAI1-like; Belongs to the GRAS family. | 0.598 |
ARF3 | LOC101508270 | A0A1S2XCU0 | A0A3Q7YGS4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | DELLA protein RHT-1-like; Belongs to the GRAS family. | 0.436 |
LOC101488979 | LOC101490374 | A0A1S2Y588 | A0A1S2XTW9 | Transcription factor PIF4-like isoform X1. | Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15. | 0.900 |
LOC101488979 | LOC101501589 | A0A1S2Y588 | A0A1S2XWX0 | Transcription factor PIF4-like isoform X1. | Transcription factor PIF3 isoform X1. | 0.912 |
LOC101488979 | LOC101503964 | A0A1S2Y588 | A0A1S2YD91 | Transcription factor PIF4-like isoform X1. | DELLA protein GAI; Belongs to the GRAS family. | 0.905 |
LOC101488979 | LOC101507839 | A0A1S2Y588 | A0A1S2YGR6 | Transcription factor PIF4-like isoform X1. | DELLA protein GAI1-like; Belongs to the GRAS family. | 0.912 |
LOC101488979 | LOC101508270 | A0A1S2Y588 | A0A3Q7YGS4 | Transcription factor PIF4-like isoform X1. | DELLA protein RHT-1-like; Belongs to the GRAS family. | 0.912 |
LOC101490374 | LOC101488979 | A0A1S2XTW9 | A0A1S2Y588 | Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15. | Transcription factor PIF4-like isoform X1. | 0.900 |
LOC101490374 | LOC101501589 | A0A1S2XTW9 | A0A1S2XWX0 | Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15. | Transcription factor PIF3 isoform X1. | 0.900 |
LOC101490374 | LOC101503964 | A0A1S2XTW9 | A0A1S2YD91 | Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15. | DELLA protein GAI; Belongs to the GRAS family. | 0.926 |
LOC101490374 | LOC101507839 | A0A1S2XTW9 | A0A1S2YGR6 | Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15. | DELLA protein GAI1-like; Belongs to the GRAS family. | 0.926 |
LOC101490374 | LOC101508270 | A0A1S2XTW9 | A0A3Q7YGS4 | Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15. | DELLA protein RHT-1-like; Belongs to the GRAS family. | 0.915 |
LOC101492626 | LOC101501795 | A0A1S2XT89 | A0A1S2XZC9 | Gibberellin receptor GID1B-like. | Gibberellin receptor GID1B-like. | 0.900 |
LOC101492626 | LOC101503964 | A0A1S2XT89 | A0A1S2YD91 | Gibberellin receptor GID1B-like. | DELLA protein GAI; Belongs to the GRAS family. | 0.977 |
LOC101492626 | LOC101507839 | A0A1S2XT89 | A0A1S2YGR6 | Gibberellin receptor GID1B-like. | DELLA protein GAI1-like; Belongs to the GRAS family. | 0.978 |
LOC101492626 | LOC101508270 | A0A1S2XT89 | A0A3Q7YGS4 | Gibberellin receptor GID1B-like. | DELLA protein RHT-1-like; Belongs to the GRAS family. | 0.975 |
LOC101492626 | LOC101513592 | A0A1S2XT89 | A0A1S2XWT1 | Gibberellin receptor GID1B-like. | Gibberellin receptor GID1C. | 0.901 |
LOC101496153 | LOC101503964 | A0A1S2YV67 | A0A1S2YD91 | Nuclear transcription factor Y subunit A-3 isoform X1. | DELLA protein GAI; Belongs to the GRAS family. | 0.663 |
LOC101496153 | LOC101507839 | A0A1S2YV67 | A0A1S2YGR6 | Nuclear transcription factor Y subunit A-3 isoform X1. | DELLA protein GAI1-like; Belongs to the GRAS family. | 0.663 |
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