Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF3 | LOC101491789 | A0A1S2XCU0 | A0A1S2XC60 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein LOC101491789. | 0.529 |
ARF3 | LOC101492120 | A0A1S2XCU0 | A0A1S2XBG1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Early nodulin-like protein 1. | 0.471 |
ARF3 | LOC101492346 | A0A1S2XCU0 | A0A1S2XDJ5 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein LOC101492346. | 0.497 |
ARF3 | LOC101497356 | A0A1S2XCU0 | A0A1S3DYX3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Probable xyloglucan endotransglucosylase/hydrolase protein 16. | 0.453 |
ARF3 | LOC101503605 | A0A1S2XCU0 | A0A1S2XVI9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein LOC101503605. | 0.489 |
ARF3 | LOC101509684 | A0A1S2XCU0 | A0A1S3E072 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | High mobility group B protein 13-like. | 0.444 |
ARF3 | LOC101512144 | A0A1S2XCU0 | A0A1S2XNA7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein LOC101512144. | 0.500 |
ARF3 | LOC113786692 | A0A1S2XCU0 | A0A3Q7YBF8 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Endoglucanase 24-like. | 0.477 |
ARF3 | NAC53 | A0A1S2XCU0 | A0A1S2YJI2 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC domain-containing protein 73. | 0.561 |
LOC101488702 | NAC53 | A0A1S2XKM9 | A0A1S2YJI2 | Protein REVEILLE 2 isoform X1. | NAC domain-containing protein 73. | 0.577 |
LOC101491789 | ARF3 | A0A1S2XC60 | A0A1S2XCU0 | Uncharacterized protein LOC101491789. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.529 |
LOC101491789 | LOC101492120 | A0A1S2XC60 | A0A1S2XBG1 | Uncharacterized protein LOC101491789. | Early nodulin-like protein 1. | 0.539 |
LOC101491789 | LOC101492346 | A0A1S2XC60 | A0A1S2XDJ5 | Uncharacterized protein LOC101491789. | Uncharacterized protein LOC101492346. | 0.503 |
LOC101491789 | LOC101497356 | A0A1S2XC60 | A0A1S3DYX3 | Uncharacterized protein LOC101491789. | Probable xyloglucan endotransglucosylase/hydrolase protein 16. | 0.506 |
LOC101491789 | LOC101503605 | A0A1S2XC60 | A0A1S2XVI9 | Uncharacterized protein LOC101491789. | Uncharacterized protein LOC101503605. | 0.491 |
LOC101491789 | LOC101509684 | A0A1S2XC60 | A0A1S3E072 | Uncharacterized protein LOC101491789. | High mobility group B protein 13-like. | 0.410 |
LOC101491789 | LOC101512144 | A0A1S2XC60 | A0A1S2XNA7 | Uncharacterized protein LOC101491789. | Uncharacterized protein LOC101512144. | 0.528 |
LOC101491789 | LOC113786692 | A0A1S2XC60 | A0A3Q7YBF8 | Uncharacterized protein LOC101491789. | Endoglucanase 24-like. | 0.545 |
LOC101491789 | NAC53 | A0A1S2XC60 | A0A1S2YJI2 | Uncharacterized protein LOC101491789. | NAC domain-containing protein 73. | 0.548 |
LOC101492120 | ARF3 | A0A1S2XBG1 | A0A1S2XCU0 | Early nodulin-like protein 1. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.471 |
page 1 of 5