Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARF23 | LOC101497300 | A0A1S2YWQ0 | A0A1S2Y5V5 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | F-box protein At2g26850-like. | 0.506 |
ARF23 | LOC101498138 | A0A1S2YWQ0 | A0A1S2YYA3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | LOB domain-containing protein 37 isoform X1. | 0.479 |
ARF23 | LOC101501775 | A0A1S2YWQ0 | A0A1S2Z1L1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC domain-containing protein 41-like. | 0.501 |
ARF23 | LOC101506914 | A0A1S2YWQ0 | A0A1S2YW48 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.488 |
ARF23 | LOC101508776 | A0A1S2YWQ0 | A0A1S2YEB9 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.479 |
ARF23 | LOC101510691 | A0A1S2YWQ0 | A0A1S2Z633 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.478 |
ARF23 | LOC101515083 | A0A1S2YWQ0 | A0A1S3E093 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Methyltransferase. | 0.493 |
ARF23 | LOC105851094 | A0A1S2YWQ0 | A0A1S3EF65 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Ethylene-responsive transcription factor-like protein At4g13040. | 0.498 |
ARF23 | LOC105852523 | A0A1S2YWQ0 | A0A1S3EG21 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein LOC105852523. | 0.478 |
ARF23 | NAC60 | A0A1S2YWQ0 | A0A1S2YUU5 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC domain-containing protein 2. | 0.486 |
LOC101497300 | ARF23 | A0A1S2Y5V5 | A0A1S2YWQ0 | F-box protein At2g26850-like. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.506 |
LOC101497300 | LOC101498138 | A0A1S2Y5V5 | A0A1S2YYA3 | F-box protein At2g26850-like. | LOB domain-containing protein 37 isoform X1. | 0.513 |
LOC101497300 | LOC101501775 | A0A1S2Y5V5 | A0A1S2Z1L1 | F-box protein At2g26850-like. | NAC domain-containing protein 41-like. | 0.532 |
LOC101497300 | LOC101506914 | A0A1S2Y5V5 | A0A1S2YW48 | F-box protein At2g26850-like. | Methyltransferase. | 0.534 |
LOC101497300 | LOC101508776 | A0A1S2Y5V5 | A0A1S2YEB9 | F-box protein At2g26850-like. | Methyltransferase. | 0.535 |
LOC101497300 | LOC101510691 | A0A1S2Y5V5 | A0A1S2Z633 | F-box protein At2g26850-like. | Methyltransferase. | 0.528 |
LOC101497300 | LOC101515083 | A0A1S2Y5V5 | A0A1S3E093 | F-box protein At2g26850-like. | Methyltransferase. | 0.533 |
LOC101497300 | LOC105851094 | A0A1S2Y5V5 | A0A1S3EF65 | F-box protein At2g26850-like. | Ethylene-responsive transcription factor-like protein At4g13040. | 0.538 |
LOC101497300 | LOC105852523 | A0A1S2Y5V5 | A0A1S3EG21 | F-box protein At2g26850-like. | Uncharacterized protein LOC105852523. | 0.472 |
LOC101497300 | NAC60 | A0A1S2Y5V5 | A0A1S2YUU5 | F-box protein At2g26850-like. | NAC domain-containing protein 2. | 0.526 |
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