LOC101505299 protein (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101505299

Transcription factor bHLH93-like isoform X1. (327 aa)

Predicted Functional Partners:

LOC101497651

0.491

LOC113784405

0.486

LOC101490323

0.476

LOC101497296

0.470

LOC101504376

0.441

LOC101502404

0.438

LOC101492148

0.434

LOC101493473

0.433

LOC101497716

0.426

LOC101501688

0.419

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101490323	LOC101492148	A0A1S2XBV1	A0A1S2YYG0	Transcription factor bHLH130-like isoform X1.	Uncharacterized protein LOC101492148 isoform X1.	0.429
LOC101490323	LOC101497296	A0A1S2XBV1	A0A3Q7XQ07	Transcription factor bHLH130-like isoform X1.	Uncharacterized protein LOC101497296.	0.406
LOC101490323	LOC101505299	A0A1S2XBV1	A0A1S2YZW0	Transcription factor bHLH130-like isoform X1.	Transcription factor bHLH93-like isoform X1.	0.476
LOC101492148	LOC101490323	A0A1S2YYG0	A0A1S2XBV1	Uncharacterized protein LOC101492148 isoform X1.	Transcription factor bHLH130-like isoform X1.	0.429
LOC101492148	LOC101493473	A0A1S2YYG0	A0A1S2YWD8	Uncharacterized protein LOC101492148 isoform X1.	Transcription factor bHLH130-like.	0.476
LOC101492148	LOC101497296	A0A1S2YYG0	A0A3Q7XQ07	Uncharacterized protein LOC101492148 isoform X1.	Uncharacterized protein LOC101497296.	0.434
LOC101492148	LOC101502404	A0A1S2YYG0	A0A1S2XKF7	Uncharacterized protein LOC101492148 isoform X1.	Uncharacterized protein At3g27210-like.	0.446
LOC101492148	LOC101505299	A0A1S2YYG0	A0A1S2YZW0	Uncharacterized protein LOC101492148 isoform X1.	Transcription factor bHLH93-like isoform X1.	0.434
LOC101493473	LOC101492148	A0A1S2YWD8	A0A1S2YYG0	Transcription factor bHLH130-like.	Uncharacterized protein LOC101492148 isoform X1.	0.476
LOC101493473	LOC101505299	A0A1S2YWD8	A0A1S2YZW0	Transcription factor bHLH130-like.	Transcription factor bHLH93-like isoform X1.	0.433
LOC101493473	LOC113784405	A0A1S2YWD8	A0A3Q7XRF7	Transcription factor bHLH130-like.	Uncharacterized protein LOC113784405.	0.403
LOC101497296	LOC101490323	A0A3Q7XQ07	A0A1S2XBV1	Uncharacterized protein LOC101497296.	Transcription factor bHLH130-like isoform X1.	0.406
LOC101497296	LOC101492148	A0A3Q7XQ07	A0A1S2YYG0	Uncharacterized protein LOC101497296.	Uncharacterized protein LOC101492148 isoform X1.	0.434
LOC101497296	LOC101497716	A0A3Q7XQ07	A0A1S2XTC7	Uncharacterized protein LOC101497296.	Transcription repressor OFP15.	0.474
LOC101497296	LOC101502404	A0A3Q7XQ07	A0A1S2XKF7	Uncharacterized protein LOC101497296.	Uncharacterized protein At3g27210-like.	0.501
LOC101497296	LOC101504376	A0A3Q7XQ07	A0A1S2Y450	Uncharacterized protein LOC101497296.	Uncharacterized protein LOC101504376 isoform X1.	0.538
LOC101497296	LOC101505299	A0A3Q7XQ07	A0A1S2YZW0	Uncharacterized protein LOC101497296.	Transcription factor bHLH93-like isoform X1.	0.470
LOC101497651	LOC101505299	A0A1S3EBC6	A0A1S2YZW0	Transcription factor bHLH122.	Transcription factor bHLH93-like isoform X1.	0.491
LOC101497716	LOC101497296	A0A1S2XTC7	A0A3Q7XQ07	Transcription repressor OFP15.	Uncharacterized protein LOC101497296.	0.474
LOC101497716	LOC101504376	A0A1S2XTC7	A0A1S2Y450	Transcription repressor OFP15.	Uncharacterized protein LOC101504376 isoform X1.	0.431