STRINGSTRING
LOC101492963 LOC101492963 ARF9 ARF9 LOC101515039 LOC101515039 LOC101511385 LOC101511385 LOC101498697 LOC101498697 NAC62 NAC62 LOC101496716 LOC101496716 LOC101504518 LOC101504518 LOC101494282 LOC101494282 NAC57 NAC57 ARF17 ARF17
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LOC101492963Transcription factor TCP20-like. (301 aa)    
Predicted Functional Partners:
ARF9
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.505
LOC101515039
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.486
LOC101511385
Transcription factor TCP13.
  
 
 
 0.479
LOC101498697
Stomatal closure-related actin-binding protein 1-like.
  
   
 0.469
NAC62
NAC domain-containing protein 71 isoform X1.
  
     0.467
LOC101496716
Stomatal closure-related actin-binding protein 1.
  
   
 0.466
LOC101504518
Transcription factor TCP2-like.
  
 
 
 0.459
LOC101494282
Protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1.
  
     0.457
NAC57
NAC domain-containing protein 100 isoform X1.
  
     0.454
ARF17
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.444
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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