LOC101496523 protein (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101496523

Zinc finger protein ZAT5. (295 aa)

Predicted Functional Partners:

ARF13

0.502

LOC101497048

0.498

LOC101514353

0.497

LOC101500344

0.494

LOC101509122

0.489

LOC101498450

0.486

LOC101489911

0.484

NAC62

0.482

LOC101513568

0.481

LOC101492256

0.481

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF13	LOC101496523	A0A1S2YEA2	A0A1S2Z6H5	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Zinc finger protein ZAT5.	0.502
ARF13	NAC62	A0A1S2YEA2	A0A1S2YY32	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein 71 isoform X1.	0.469
LOC101489911	LOC101496523	A0A1S2Z1J0	A0A1S2Z6H5	Protein BASIC PENTACYSTEINE1-like.	Zinc finger protein ZAT5.	0.484
LOC101489911	LOC101513568	A0A1S2Z1J0	A0A1S2XPH9	Protein BASIC PENTACYSTEINE1-like.	Senescence associated gene 20-like.	0.452
LOC101489911	LOC101514353	A0A1S2Z1J0	A0A1S2XZT0	Protein BASIC PENTACYSTEINE1-like.	Uncharacterized protein LOC101514353.	0.431
LOC101492256	LOC101496523	A0A1S2YR60	A0A1S2Z6H5	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	Zinc finger protein ZAT5.	0.481
LOC101492256	LOC101498450	A0A1S2YR60	A0A1S2XFE4	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	Protein MIZU-KUSSEI 1.	0.424
LOC101492256	LOC101509122	A0A1S2YR60	A0A1S2XGJ4	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	CBS domain-containing protein CBSX5.	0.414
LOC101492256	LOC101514353	A0A1S2YR60	A0A1S2XZT0	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	Uncharacterized protein LOC101514353.	0.474
LOC101496523	ARF13	A0A1S2Z6H5	A0A1S2YEA2	Zinc finger protein ZAT5.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.502
LOC101496523	LOC101489911	A0A1S2Z6H5	A0A1S2Z1J0	Zinc finger protein ZAT5.	Protein BASIC PENTACYSTEINE1-like.	0.484
LOC101496523	LOC101492256	A0A1S2Z6H5	A0A1S2YR60	Zinc finger protein ZAT5.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.481
LOC101496523	LOC101497048	A0A1S2Z6H5	A0A1S2XTG6	Zinc finger protein ZAT5.	Uncharacterized protein LOC101497048.	0.498
LOC101496523	LOC101498450	A0A1S2Z6H5	A0A1S2XFE4	Zinc finger protein ZAT5.	Protein MIZU-KUSSEI 1.	0.486
LOC101496523	LOC101500344	A0A1S2Z6H5	A0A1S2Y828	Zinc finger protein ZAT5.	UPF0496 protein At1g20180.	0.494
LOC101496523	LOC101509122	A0A1S2Z6H5	A0A1S2XGJ4	Zinc finger protein ZAT5.	CBS domain-containing protein CBSX5.	0.489
LOC101496523	LOC101513568	A0A1S2Z6H5	A0A1S2XPH9	Zinc finger protein ZAT5.	Senescence associated gene 20-like.	0.481
LOC101496523	LOC101514353	A0A1S2Z6H5	A0A1S2XZT0	Zinc finger protein ZAT5.	Uncharacterized protein LOC101514353.	0.497
LOC101496523	NAC62	A0A1S2Z6H5	A0A1S2YY32	Zinc finger protein ZAT5.	NAC domain-containing protein 71 isoform X1.	0.482
LOC101497048	LOC101496523	A0A1S2XTG6	A0A1S2Z6H5	Uncharacterized protein LOC101497048.	Zinc finger protein ZAT5.	0.498