STRINGSTRING
R0EV46_9BRAS R0EV46_9BRAS R0FD49_9BRAS R0FD49_9BRAS R0H5U1_9BRAS R0H5U1_9BRAS R0IE97_9BRAS R0IE97_9BRAS R0GQE1_9BRAS R0GQE1_9BRAS R0H1U7_9BRAS R0H1U7_9BRAS R0IA66_9BRAS R0IA66_9BRAS R0GFA5_9BRAS R0GFA5_9BRAS R0ETS4_9BRAS R0ETS4_9BRAS R0FCH2_9BRAS R0FCH2_9BRAS R0G7Y9_9BRAS R0G7Y9_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0EV46_9BRASUncharacterized protein. (718 aa)    
Predicted Functional Partners:
R0FD49_9BRAS
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.982
R0H5U1_9BRAS
WD_REPEATS_REGION domain-containing protein.
   
 0.982
R0IE97_9BRAS
TPR_REGION domain-containing protein.
   
 0.981
R0GQE1_9BRAS
WD_REPEATS_REGION domain-containing protein.
   
 0.980
R0H1U7_9BRAS
Pre-mRNA cleavage factor Im 25 kDa subunit; Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing.
    
 0.978
R0IA66_9BRAS
Uncharacterized protein.
   
 0.976
R0GFA5_9BRAS
RRM domain-containing protein.
   
 0.975
R0ETS4_9BRAS
Fip1 domain-containing protein.
    
 0.956
R0FCH2_9BRAS
Uncharacterized protein.
   
 0.956
R0G7Y9_9BRAS
Myb-like domain-containing protein.
   
 0.956
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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