STRINGSTRING
R0GQY4_9BRAS R0GQY4_9BRAS R0GWJ1_9BRAS R0GWJ1_9BRAS R0FR57_9BRAS R0FR57_9BRAS R0F426_9BRAS R0F426_9BRAS R0FNG0_9BRAS R0FNG0_9BRAS R0GI87_9BRAS R0GI87_9BRAS R0GI95_9BRAS R0GI95_9BRAS R0I1T4_9BRAS R0I1T4_9BRAS R0HF42_9BRAS R0HF42_9BRAS R0GWW5_9BRAS R0GWW5_9BRAS R0GDZ3_9BRAS R0GDZ3_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GQY4_9BRASC3H1-type domain-containing protein. (364 aa)    
Predicted Functional Partners:
R0GWJ1_9BRAS
Uncharacterized protein; Belongs to the peptidase C1 family.
    
 
 0.971
R0FR57_9BRAS
FLZ-type domain-containing protein.
      
 0.940
R0F426_9BRAS
tRNA-dihydrouridine(47) synthase [NAD(P)(+)].
      
 0.760
R0FNG0_9BRAS
Uncharacterized protein.
      
 0.760
R0GI87_9BRAS
Uncharacterized protein.
      
 0.760
R0GI95_9BRAS
Uncharacterized protein.
      
 0.730
R0I1T4_9BRAS
Uncharacterized protein.
      
 0.642
R0HF42_9BRAS
GRAS domain-containing protein; Belongs to the GRAS family.
      
 0.540
R0GWW5_9BRAS
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
      
 0.512
R0GDZ3_9BRAS
CBFD_NFYB_HMF domain-containing protein.
      
 0.482
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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