R0GUI6_9BRAS protein (Capsella rubella) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

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[Homology]

Score

R0GUI6_9BRAS

Uncharacterized protein. (990 aa)

Predicted Functional Partners:

R0G3U8_9BRAS

0.876

R0FQZ4_9BRAS

0.735

R0ISL5_9BRAS

0.734

R0I6M6_9BRAS

0.731

R0HNR2_9BRAS

0.711

R0IPF4_9BRAS

0.711

R0FT12_9BRAS

0.707

R0GYW9_9BRAS

0.692

R0HWJ4_9BRAS

0.689

R0G621_9BRAS

0.666

Your Current Organism:

Capsella rubella

NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R0FQZ4_9BRAS	R0G621_9BRAS	R0FQZ4	R0G621	Uncharacterized protein.	NAC domain-containing protein.	0.772
R0FQZ4_9BRAS	R0GUI6_9BRAS	R0FQZ4	R0GUI6	Uncharacterized protein.	Uncharacterized protein.	0.735
R0FQZ4_9BRAS	R0GYW9_9BRAS	R0FQZ4	R0GYW9	Uncharacterized protein.	NAC domain-containing protein.	0.773
R0FQZ4_9BRAS	R0IPF4_9BRAS	R0FQZ4	R0IPF4	Uncharacterized protein.	Uncharacterized protein.	0.939
R0FQZ4_9BRAS	R0ISL5_9BRAS	R0FQZ4	R0ISL5	Uncharacterized protein.	NAC domain-containing protein.	0.884
R0FT12_9BRAS	R0GUI6_9BRAS	R0FT12	R0GUI6	Uncharacterized protein.	Uncharacterized protein.	0.707
R0G3U8_9BRAS	R0GUI6_9BRAS	R0G3U8	R0GUI6	CRC domain-containing protein.	Uncharacterized protein.	0.876
R0G3U8_9BRAS	R0HWJ4_9BRAS	R0G3U8	R0HWJ4	CRC domain-containing protein.	Uncharacterized protein.	0.845
R0G3U8_9BRAS	R0I6M6_9BRAS	R0G3U8	R0I6M6	CRC domain-containing protein.	E2F_TDP domain-containing protein.	0.734
R0G621_9BRAS	R0FQZ4_9BRAS	R0G621	R0FQZ4	NAC domain-containing protein.	Uncharacterized protein.	0.772
R0G621_9BRAS	R0GUI6_9BRAS	R0G621	R0GUI6	NAC domain-containing protein.	Uncharacterized protein.	0.666
R0G621_9BRAS	R0I6M6_9BRAS	R0G621	R0I6M6	NAC domain-containing protein.	E2F_TDP domain-containing protein.	0.501
R0G621_9BRAS	R0IPF4_9BRAS	R0G621	R0IPF4	NAC domain-containing protein.	Uncharacterized protein.	0.772
R0GUI6_9BRAS	R0FQZ4_9BRAS	R0GUI6	R0FQZ4	Uncharacterized protein.	Uncharacterized protein.	0.735
R0GUI6_9BRAS	R0FT12_9BRAS	R0GUI6	R0FT12	Uncharacterized protein.	Uncharacterized protein.	0.707
R0GUI6_9BRAS	R0G3U8_9BRAS	R0GUI6	R0G3U8	Uncharacterized protein.	CRC domain-containing protein.	0.876
R0GUI6_9BRAS	R0G621_9BRAS	R0GUI6	R0G621	Uncharacterized protein.	NAC domain-containing protein.	0.666
R0GUI6_9BRAS	R0GYW9_9BRAS	R0GUI6	R0GYW9	Uncharacterized protein.	NAC domain-containing protein.	0.692
R0GUI6_9BRAS	R0HNR2_9BRAS	R0GUI6	R0HNR2	Uncharacterized protein.	Uncharacterized protein.	0.711
R0GUI6_9BRAS	R0HWJ4_9BRAS	R0GUI6	R0HWJ4	Uncharacterized protein.	Uncharacterized protein.	0.689