STRINGSTRING
R0H2N7_9BRAS R0H2N7_9BRAS R0EUG1_9BRAS R0EUG1_9BRAS R0GC66_9BRAS R0GC66_9BRAS R0GA33_9BRAS R0GA33_9BRAS R0I647_9BRAS R0I647_9BRAS R0I8B3_9BRAS R0I8B3_9BRAS R0I8T3_9BRAS R0I8T3_9BRAS R0GE80_9BRAS R0GE80_9BRAS R0G942_9BRAS R0G942_9BRAS R0IG04_9BRAS R0IG04_9BRAS R0H9P9_9BRAS R0H9P9_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0H2N7_9BRASUncharacterized protein. (347 aa)    
Predicted Functional Partners:
R0EUG1_9BRAS
Uncharacterized protein; Belongs to the plant LTP family.
      
 0.760
R0GC66_9BRAS
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
    
 0.719
R0GA33_9BRAS
TF-B3 domain-containing protein.
      
0.679
R0I647_9BRAS
Uncharacterized protein.
  
 
  0.513
R0I8B3_9BRAS
Uncharacterized protein.
  
 
  0.513
R0I8T3_9BRAS
Uncharacterized protein.
  
 
  0.512
R0GE80_9BRAS
BHLH domain-containing protein.
  
     0.510
R0G942_9BRAS
Uncharacterized protein.
  
 
  0.509
R0IG04_9BRAS
HMA domain-containing protein.
  
     0.494
R0H9P9_9BRAS
MADS-box domain-containing protein.
  
     0.485
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (16%) [HD]