STRINGSTRING
R0GSE7_9BRAS R0GSE7_9BRAS R0FZQ6_9BRAS R0FZQ6_9BRAS R0FD64_9BRAS R0FD64_9BRAS R0I395_9BRAS R0I395_9BRAS R0GMF8_9BRAS R0GMF8_9BRAS R0IJW8_9BRAS R0IJW8_9BRAS R0GWC8_9BRAS R0GWC8_9BRAS R0GTD2_9BRAS R0GTD2_9BRAS R0FI18_9BRAS R0FI18_9BRAS R0FJ04_9BRAS R0FJ04_9BRAS R0GZ90_9BRAS R0GZ90_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GSE7_9BRASUncharacterized protein. (1308 aa)    
Predicted Functional Partners:
R0FZQ6_9BRAS
Uncharacterized protein.
   
 0.986
R0FD64_9BRAS
CXC domain-containing protein.
   
 0.983
R0I395_9BRAS
WD_REPEATS_REGION domain-containing protein.
   
 0.982
R0GMF8_9BRAS
Histone domain-containing protein.
   
 0.981
R0IJW8_9BRAS
Histone domain-containing protein.
   
 0.981
R0GWC8_9BRAS
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
  
 0.975
R0GTD2_9BRAS
Uncharacterized protein.
   
 0.967
R0FI18_9BRAS
Histone domain-containing protein.
   
 0.965
R0FJ04_9BRAS
Histone H3; Belongs to the histone H3 family.
   
 0.965
R0GZ90_9BRAS
Histone H3; Belongs to the histone H3 family.
   
 0.965
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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