STRINGSTRING
R0H838_9BRAS R0H838_9BRAS R0GGG4_9BRAS R0GGG4_9BRAS R0FTS8_9BRAS R0FTS8_9BRAS R0G6Z7_9BRAS R0G6Z7_9BRAS R0FQ93_9BRAS R0FQ93_9BRAS R0F4D1_9BRAS R0F4D1_9BRAS R0GFF5_9BRAS R0GFF5_9BRAS R0EZD1_9BRAS R0EZD1_9BRAS R0GCV5_9BRAS R0GCV5_9BRAS R0GSX5_9BRAS R0GSX5_9BRAS R0EVF8_9BRAS R0EVF8_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0H838_9BRASUncharacterized protein. (340 aa)    
Predicted Functional Partners:
R0GGG4_9BRAS
Uncharacterized protein.
    
 0.972
R0FTS8_9BRAS
Dof-type domain-containing protein.
    
 
 0.916
R0G6Z7_9BRAS
AP2/ERF domain-containing protein.
    
 
 0.863
R0FQ93_9BRAS
Dof-type domain-containing protein.
    
 
 0.808
R0F4D1_9BRAS
Uncharacterized protein.
    
 0.792
R0GFF5_9BRAS
BZIP domain-containing protein.
      
 0.773
R0EZD1_9BRAS
LOB domain-containing protein.
      
 0.772
R0GCV5_9BRAS
Uncharacterized protein.
      
 0.771
R0GSX5_9BRAS
Uncharacterized protein.
      
 0.771
R0EVF8_9BRAS
Uncharacterized protein.
    
 0.768
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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