STRINGSTRING
R0HCF1_9BRAS R0HCF1_9BRAS R0F473_9BRAS R0F473_9BRAS R0I8U8_9BRAS R0I8U8_9BRAS R0I4J3_9BRAS R0I4J3_9BRAS R0G451_9BRAS R0G451_9BRAS R0HM34_9BRAS R0HM34_9BRAS R0FY45_9BRAS R0FY45_9BRAS R0HP94_9BRAS R0HP94_9BRAS R0FD08_9BRAS R0FD08_9BRAS Cr_7610 Cr_7610 R0FH96_9BRAS R0FH96_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HCF1_9BRASBHLH domain-containing protein. (268 aa)    
Predicted Functional Partners:
R0F473_9BRAS
BHLH domain-containing protein.
      
 0.769
R0I8U8_9BRAS
PAS domain-containing protein.
      
 0.701
R0I4J3_9BRAS
BHLH domain-containing protein.
      
 0.542
R0G451_9BRAS
PAS domain-containing protein.
      
 0.540
R0HM34_9BRAS
Elf4 domain-containing protein.
  
   
 0.533
R0FY45_9BRAS
Myc_N domain-containing protein.
      
 0.476
R0HP94_9BRAS
GATA-type domain-containing protein.
      
 0.476
R0FD08_9BRAS
NAC domain-containing protein.
  
     0.454
Cr_7610
F-box protein.
  
     0.436
R0FH96_9BRAS
Uncharacterized protein.
  
     0.422
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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