STRINGSTRING
R0FGQ6_9BRAS R0FGQ6_9BRAS R0GHU9_9BRAS R0GHU9_9BRAS R0IGT7_9BRAS R0IGT7_9BRAS R0HND4_9BRAS R0HND4_9BRAS R0H0C9_9BRAS R0H0C9_9BRAS R0G5W8_9BRAS R0G5W8_9BRAS R0EWR4_9BRAS R0EWR4_9BRAS R0GWC9_9BRAS R0GWC9_9BRAS R0HAF6_9BRAS R0HAF6_9BRAS R0F404_9BRAS R0F404_9BRAS R0FTN1_9BRAS R0FTN1_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FGQ6_9BRASLOB domain-containing protein. (231 aa)    
Predicted Functional Partners:
R0GHU9_9BRAS
NAC domain-containing protein.
      
 0.875
R0IGT7_9BRAS
NAC domain-containing protein.
      
 0.857
R0HND4_9BRAS
Uncharacterized protein.
    
 
 0.774
R0H0C9_9BRAS
Uncharacterized protein; Belongs to the peptidase C1 family.
   
  
 0.772
R0G5W8_9BRAS
Uncharacterized protein.
      
 0.769
R0EWR4_9BRAS
GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily.
    
 0.764
R0GWC9_9BRAS
Uncharacterized protein.
      
 0.760
R0HAF6_9BRAS
NAC domain-containing protein.
      
 0.760
R0F404_9BRAS
NAC domain-containing protein.
    
 0.753
R0FTN1_9BRAS
NAC domain-containing protein.
      
 0.734
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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