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R0HJB8_9BRAS R0HJB8_9BRAS R0IQP5_9BRAS R0IQP5_9BRAS R0HGR8_9BRAS R0HGR8_9BRAS R0HIR7_9BRAS R0HIR7_9BRAS R0HDF0_9BRAS R0HDF0_9BRAS R0GKI8_9BRAS R0GKI8_9BRAS R0I4D5_9BRAS R0I4D5_9BRAS R0HY02_9BRAS R0HY02_9BRAS R0HPN4_9BRAS R0HPN4_9BRAS R0FIB4_9BRAS R0FIB4_9BRAS R0HKY1_9BRAS R0HKY1_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HJB8_9BRASLOB domain-containing protein. (219 aa)    
Predicted Functional Partners:
R0IQP5_9BRAS
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
    
 0.815
R0HGR8_9BRAS
Homeobox domain-containing protein.
    
 
 0.767
R0HIR7_9BRAS
Homeobox domain-containing protein.
    
 
 0.767
R0HDF0_9BRAS
Homeobox domain-containing protein.
  
   
 0.730
R0GKI8_9BRAS
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
    
 0.717
R0I4D5_9BRAS
Homeobox domain-containing protein.
      
 0.700
R0HY02_9BRAS
SET domain-containing protein.
   
 0.698
R0HPN4_9BRAS
BZIP domain-containing protein.
      
 0.697
R0FIB4_9BRAS
AP2/ERF domain-containing protein.
      
 0.692
R0HKY1_9BRAS
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.684
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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