STRINGSTRING
R0HNG8_9BRAS R0HNG8_9BRAS R0GC68_9BRAS R0GC68_9BRAS R0FM64_9BRAS R0FM64_9BRAS R0FJ92_9BRAS R0FJ92_9BRAS R0HNH3_9BRAS R0HNH3_9BRAS R0ILV1_9BRAS R0ILV1_9BRAS R0FNB3_9BRAS R0FNB3_9BRAS R0FUP9_9BRAS R0FUP9_9BRAS R0GAN0_9BRAS R0GAN0_9BRAS R0GXE1_9BRAS R0GXE1_9BRAS R0FYS9_9BRAS R0FYS9_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HNG8_9BRASC2H2-type domain-containing protein. (255 aa)    
Predicted Functional Partners:
R0GC68_9BRAS
Myb-like domain-containing protein.
      
 0.772
R0FM64_9BRAS
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
      
 0.726
R0FJ92_9BRAS
Uncharacterized protein.
      
 0.710
R0HNH3_9BRAS
Uncharacterized protein.
      
 0.702
R0ILV1_9BRAS
Uncharacterized protein.
      
 0.702
R0FNB3_9BRAS
UBX domain-containing protein.
      
 0.701
R0FUP9_9BRAS
Uncharacterized protein.
  
   
 0.695
R0GAN0_9BRAS
C2H2-type domain-containing protein.
  
   
 0.690
R0GXE1_9BRAS
Uncharacterized protein.
      
 0.682
R0FYS9_9BRAS
SANT domain-containing protein.
      
 0.621
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (28%) [HD]