STRINGSTRING
R0FXI7_9BRAS R0FXI7_9BRAS R0GPB9_9BRAS R0GPB9_9BRAS R0GZB5_9BRAS R0GZB5_9BRAS R0GAI4_9BRAS R0GAI4_9BRAS R0GN95_9BRAS R0GN95_9BRAS R0HPU4_9BRAS R0HPU4_9BRAS R0HZB2_9BRAS R0HZB2_9BRAS R0IGP0_9BRAS R0IGP0_9BRAS R0FFU3_9BRAS R0FFU3_9BRAS R0HTW8_9BRAS R0HTW8_9BRAS R0FN50_9BRAS R0FN50_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0FXI7_9BRASUncharacterized protein. (340 aa)    
Predicted Functional Partners:
R0GPB9_9BRAS
Uncharacterized protein.
      
 0.778
R0GZB5_9BRAS
Uncharacterized protein.
      
 0.760
R0GAI4_9BRAS
Uncharacterized protein.
      
 0.711
R0GN95_9BRAS
F-box domain-containing protein.
      
 0.569
R0HPU4_9BRAS
F-box domain-containing protein.
      
 0.569
R0HZB2_9BRAS
F-box domain-containing protein.
      
 0.569
R0IGP0_9BRAS
Uncharacterized protein.
      
 0.542
R0FFU3_9BRAS
G-patch domain-containing protein.
      
 0.540
R0HTW8_9BRAS
Uncharacterized protein.
      
 0.518
R0FN50_9BRAS
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.484
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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