STRINGSTRING
R0HUS9_9BRAS R0HUS9_9BRAS R0FWQ6_9BRAS R0FWQ6_9BRAS R0HG62_9BRAS R0HG62_9BRAS R0FPG3_9BRAS R0FPG3_9BRAS R0G1L8_9BRAS R0G1L8_9BRAS R0FRK3_9BRAS R0FRK3_9BRAS R0F289_9BRAS R0F289_9BRAS R0IFS1_9BRAS R0IFS1_9BRAS R0H6W1_9BRAS R0H6W1_9BRAS R0HWJ6_9BRAS R0HWJ6_9BRAS R0FKT7_9BRAS R0FKT7_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HUS9_9BRASUncharacterized protein. (229 aa)    
Predicted Functional Partners:
R0FWQ6_9BRAS
Uncharacterized protein.
      
 0.879
R0HG62_9BRAS
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.862
R0FPG3_9BRAS
Uncharacterized protein.
  
   
 0.818
R0G1L8_9BRAS
CDT1 domain-containing protein.
      
 0.613
R0FRK3_9BRAS
BZIP domain-containing protein.
      
 0.541
R0F289_9BRAS
AvrRpt-cleavage domain-containing protein.
  
     0.529
R0IFS1_9BRAS
Uncharacterized protein.
  
     0.528
R0H6W1_9BRAS
Phytocyanin domain-containing protein.
  
     0.521
R0HWJ6_9BRAS
AAI domain-containing protein; Belongs to the plant LTP family.
  
     0.520
R0FKT7_9BRAS
NAC domain-containing protein.
  
     0.519
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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