Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
R0EYU5_9BRAS | R0G5H1_9BRAS | R0EYU5 | R0G5H1 | Uncharacterized protein. | AP2/ERF domain-containing protein. | 0.772 |
R0EYU5_9BRAS | R0GZQ1_9BRAS | R0EYU5 | R0GZQ1 | Uncharacterized protein. | Uncharacterized protein. | 0.616 |
R0EYU5_9BRAS | R0H7F8_9BRAS | R0EYU5 | R0H7F8 | Uncharacterized protein. | BURP domain-containing protein. | 0.911 |
R0F0N7_9BRAS | R0FEU0_9BRAS | R0F0N7 | R0FEU0 | Uncharacterized protein. | HSF_DOMAIN domain-containing protein. | 0.478 |
R0F0N7_9BRAS | R0G5H1_9BRAS | R0F0N7 | R0G5H1 | Uncharacterized protein. | AP2/ERF domain-containing protein. | 0.814 |
R0F0N7_9BRAS | R0GZQ1_9BRAS | R0F0N7 | R0GZQ1 | Uncharacterized protein. | Uncharacterized protein. | 0.760 |
R0F0N7_9BRAS | R0H7F8_9BRAS | R0F0N7 | R0H7F8 | Uncharacterized protein. | BURP domain-containing protein. | 0.912 |
R0FBU1_9BRAS | R0FNJ0_9BRAS | R0FBU1 | R0FNJ0 | Uncharacterized protein. | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | 0.999 |
R0FBU1_9BRAS | R0FQR2_9BRAS | R0FBU1 | R0FQR2 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.935 |
R0FBU1_9BRAS | R0G5H1_9BRAS | R0FBU1 | R0G5H1 | Uncharacterized protein. | AP2/ERF domain-containing protein. | 0.756 |
R0FBU1_9BRAS | R0G6M0_9BRAS | R0FBU1 | R0G6M0 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.990 |
R0FBU1_9BRAS | R0HAM0_9BRAS | R0FBU1 | R0HAM0 | Uncharacterized protein. | Uncharacterized protein. | 0.710 |
R0FEU0_9BRAS | R0F0N7_9BRAS | R0FEU0 | R0F0N7 | HSF_DOMAIN domain-containing protein. | Uncharacterized protein. | 0.478 |
R0FEU0_9BRAS | R0G5H1_9BRAS | R0FEU0 | R0G5H1 | HSF_DOMAIN domain-containing protein. | AP2/ERF domain-containing protein. | 0.683 |
R0FEU0_9BRAS | R0GZQ1_9BRAS | R0FEU0 | R0GZQ1 | HSF_DOMAIN domain-containing protein. | Uncharacterized protein. | 0.476 |
R0FNJ0_9BRAS | R0FBU1_9BRAS | R0FNJ0 | R0FBU1 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Uncharacterized protein. | 0.999 |
R0FNJ0_9BRAS | R0FQR2_9BRAS | R0FNJ0 | R0FQR2 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.935 |
R0FNJ0_9BRAS | R0G5H1_9BRAS | R0FNJ0 | R0G5H1 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | AP2/ERF domain-containing protein. | 0.777 |
R0FNJ0_9BRAS | R0G6M0_9BRAS | R0FNJ0 | R0G6M0 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | RPOLD domain-containing protein. | 0.989 |
R0FNJ0_9BRAS | R0HAM0_9BRAS | R0FNJ0 | R0HAM0 | FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] | Uncharacterized protein. | 0.700 |
page 1 of 3