STRINGSTRING
R0HM89_9BRAS R0HM89_9BRAS R0FND7_9BRAS R0FND7_9BRAS R0H7N8_9BRAS R0H7N8_9BRAS R0H234_9BRAS R0H234_9BRAS R0EXW8_9BRAS R0EXW8_9BRAS R0HYB4_9BRAS R0HYB4_9BRAS R0ICZ0_9BRAS R0ICZ0_9BRAS R0FTE7_9BRAS R0FTE7_9BRAS R0FL24_9BRAS R0FL24_9BRAS R0FMW6_9BRAS R0FMW6_9BRAS R0FQF3_9BRAS R0FQF3_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HM89_9BRASBHLH domain-containing protein. (370 aa)    
Predicted Functional Partners:
R0FND7_9BRAS
Uncharacterized protein.
  
   
 0.798
R0H7N8_9BRAS
Uncharacterized protein.
      
 0.731
R0H234_9BRAS
Uncharacterized protein.
  
   
 0.710
R0EXW8_9BRAS
Uncharacterized protein.
      
 0.700
R0HYB4_9BRAS
DUF641 domain-containing protein.
      
 0.685
R0ICZ0_9BRAS
DUF641 domain-containing protein.
      
 0.685
R0FTE7_9BRAS
Uncharacterized protein.
    
 0.628
R0FL24_9BRAS
Uncharacterized protein.
      
 0.617
R0FMW6_9BRAS
CID domain-containing protein.
      
 0.617
R0FQF3_9BRAS
Uncharacterized protein.
      
 0.617
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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