STRINGSTRING
R0HPE7_9BRAS R0HPE7_9BRAS R0I499_9BRAS R0I499_9BRAS R0EZ68_9BRAS R0EZ68_9BRAS R0GPG6_9BRAS R0GPG6_9BRAS R0ISA4_9BRAS R0ISA4_9BRAS R0GIN8_9BRAS R0GIN8_9BRAS R0HJI7_9BRAS R0HJI7_9BRAS R0GB34_9BRAS R0GB34_9BRAS R0GH62_9BRAS R0GH62_9BRAS R0FY11_9BRAS R0FY11_9BRAS R0IMP1_9BRAS R0IMP1_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HPE7_9BRASGATA-type domain-containing protein. (148 aa)    
Predicted Functional Partners:
R0I499_9BRAS
Uncharacterized protein.
  
   
 0.823
R0EZ68_9BRAS
Uncharacterized protein.
      
 0.773
R0GPG6_9BRAS
Uncharacterized protein.
      
 0.760
R0ISA4_9BRAS
C2H2-type domain-containing protein.
    
 0.720
R0GIN8_9BRAS
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.710
R0HJI7_9BRAS
C2H2-type domain-containing protein.
    
 0.545
R0GB34_9BRAS
Arf-GAP domain-containing protein.
      
 0.518
R0GH62_9BRAS
Two-component response regulator; Transcriptional activator that binds specific DNA sequence.
      
 0.487
R0FY11_9BRAS
GATA-type domain-containing protein.
  
     0.432
R0IMP1_9BRAS
Uncharacterized protein.
      
 0.405
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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