STRINGSTRING
R0I5F4_9BRAS R0I5F4_9BRAS R0II30_9BRAS R0II30_9BRAS R0H8E4_9BRAS R0H8E4_9BRAS R0H2H9_9BRAS R0H2H9_9BRAS R0IQP5_9BRAS R0IQP5_9BRAS R0GAF3_9BRAS R0GAF3_9BRAS R0FUE1_9BRAS R0FUE1_9BRAS R0GX21_9BRAS R0GX21_9BRAS R0GXA8_9BRAS R0GXA8_9BRAS R0FSX2_9BRAS R0FSX2_9BRAS R0EWQ2_9BRAS R0EWQ2_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0I5F4_9BRASAP2/ERF domain-containing protein. (248 aa)    
Predicted Functional Partners:
R0II30_9BRAS
AP2/ERF domain-containing protein.
  
   
 0.873
R0H8E4_9BRAS
BZIP domain-containing protein.
  
   
 0.783
R0H2H9_9BRAS
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
      
 0.732
R0IQP5_9BRAS
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.621
R0GAF3_9BRAS
NAC domain-containing protein.
      
 0.579
R0FUE1_9BRAS
Dof-type domain-containing protein.
  
     0.530
R0GX21_9BRAS
Dof-type domain-containing protein.
  
     0.529
R0GXA8_9BRAS
Dof-type domain-containing protein.
  
     0.529
R0FSX2_9BRAS
Dof-type domain-containing protein.
  
     0.528
R0EWQ2_9BRAS
Dof-type domain-containing protein.
  
     0.525
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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