STRINGSTRING
R0HU07_9BRAS R0HU07_9BRAS R0GKB4_9BRAS R0GKB4_9BRAS R0GSZ0_9BRAS R0GSZ0_9BRAS R0I720_9BRAS R0I720_9BRAS R0IF52_9BRAS R0IF52_9BRAS R0GNX7_9BRAS R0GNX7_9BRAS R0IRL7_9BRAS R0IRL7_9BRAS R0GBH7_9BRAS R0GBH7_9BRAS R0HUJ2_9BRAS R0HUJ2_9BRAS GATC GATC R0GV05_9BRAS R0GV05_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HU07_9BRASC2H2-type domain-containing protein. (512 aa)    
Predicted Functional Partners:
R0GKB4_9BRAS
Uncharacterized protein.
   
 0.969
R0GSZ0_9BRAS
Uncharacterized protein.
    
 0.966
R0I720_9BRAS
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.965
R0IF52_9BRAS
WD_REPEATS_REGION domain-containing protein.
    
 0.958
R0GNX7_9BRAS
Nup54 domain-containing protein.
    
 0.955
R0IRL7_9BRAS
Uncharacterized protein.
    
 0.948
R0GBH7_9BRAS
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.947
R0HUJ2_9BRAS
Uncharacterized protein.
   
 0.947
GATC
Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
    
 0.931
R0GV05_9BRAS
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.931
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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