STRINGSTRING
R0HU72_9BRAS R0HU72_9BRAS R0FU54_9BRAS R0FU54_9BRAS R0GJN6_9BRAS R0GJN6_9BRAS R0H040_9BRAS R0H040_9BRAS R0IC75_9BRAS R0IC75_9BRAS R0FUY7_9BRAS R0FUY7_9BRAS R0GGG6_9BRAS R0GGG6_9BRAS R0GVP2_9BRAS R0GVP2_9BRAS Cr_7580 Cr_7580 R0F234_9BRAS R0F234_9BRAS R0I5F4_9BRAS R0I5F4_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0HU72_9BRASDof-type domain-containing protein. (384 aa)    
Predicted Functional Partners:
R0FU54_9BRAS
RING-type domain-containing protein.
      
 0.773
R0GJN6_9BRAS
NAC domain-containing protein.
      
 0.760
R0H040_9BRAS
Uncharacterized protein.
      
 0.756
R0IC75_9BRAS
BZIP domain-containing protein.
  
   
 0.584
R0FUY7_9BRAS
RING-type domain-containing protein.
      
 0.568
R0GGG6_9BRAS
AP2/ERF domain-containing protein.
  
     0.521
R0GVP2_9BRAS
AP2/ERF domain-containing protein.
  
     0.519
Cr_7580
AP2 transcription factor.
  
   
 0.518
R0F234_9BRAS
AP2/ERF domain-containing protein.
  
     0.511
R0I5F4_9BRAS
AP2/ERF domain-containing protein.
  
     0.508
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (12%) [HD]