STRINGSTRING
R0GEL1_9BRAS R0GEL1_9BRAS R0I7D5_9BRAS R0I7D5_9BRAS R0GHN1_9BRAS R0GHN1_9BRAS R0GTB7_9BRAS R0GTB7_9BRAS R0H3A0_9BRAS R0H3A0_9BRAS R0HHM7_9BRAS R0HHM7_9BRAS R0H9E4_9BRAS R0H9E4_9BRAS R0H7Q2_9BRAS R0H7Q2_9BRAS R0GIV6_9BRAS R0GIV6_9BRAS R0HHG0_9BRAS R0HHG0_9BRAS R0HZ82_9BRAS R0HZ82_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GEL1_9BRASUncharacterized protein. (334 aa)    
Predicted Functional Partners:
R0I7D5_9BRAS
Uncharacterized protein.
      
 0.760
R0GHN1_9BRAS
RING-type domain-containing protein.
      
 0.579
R0GTB7_9BRAS
Uncharacterized protein.
      
 0.564
R0H3A0_9BRAS
Uncharacterized protein.
      
 0.559
R0HHM7_9BRAS
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
      
 0.559
R0H9E4_9BRAS
Uncharacterized protein.
      
 0.541
R0H7Q2_9BRAS
G protein gamma domain-containing protein.
      
 0.540
R0GIV6_9BRAS
Uncharacterized protein.
  
     0.517
R0HHG0_9BRAS
FLZ-type domain-containing protein.
  
     0.517
R0HZ82_9BRAS
TCP domain-containing protein.
  
 
   0.512
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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