STRINGSTRING
R0GJ42_9BRAS R0GJ42_9BRAS R0I2K4_9BRAS R0I2K4_9BRAS R0GM17_9BRAS R0GM17_9BRAS R0FJL2_9BRAS R0FJL2_9BRAS R0I173_9BRAS R0I173_9BRAS R0GPL9_9BRAS R0GPL9_9BRAS R0IFC4_9BRAS R0IFC4_9BRAS R0G1C3_9BRAS R0G1C3_9BRAS R0H962_9BRAS R0H962_9BRAS R0HKP8_9BRAS R0HKP8_9BRAS R0F627_9BRAS R0F627_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0GJ42_9BRASSANT domain-containing protein. (121 aa)    
Predicted Functional Partners:
R0I2K4_9BRAS
Uncharacterized protein.
     
 0.780
R0GM17_9BRAS
C2H2-type domain-containing protein.
      
 0.771
R0FJL2_9BRAS
C2H2-type domain-containing protein.
      
 0.760
R0I173_9BRAS
AAA domain-containing protein; Belongs to the AAA ATPase family.
      
 0.731
R0GPL9_9BRAS
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.702
R0IFC4_9BRAS
BHLH domain-containing protein.
      
 0.699
R0G1C3_9BRAS
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.666
R0H962_9BRAS
Uncharacterized protein.
   
 
 0.572
R0HKP8_9BRAS
Uncharacterized protein.
   
 
 0.572
R0F627_9BRAS
Uncharacterized protein.
      
 0.483
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
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