STRINGSTRING
R0IF40_9BRAS R0IF40_9BRAS R0I855_9BRAS R0I855_9BRAS R0GEA3_9BRAS R0GEA3_9BRAS R0EZF4_9BRAS R0EZF4_9BRAS R0HKY3_9BRAS R0HKY3_9BRAS R0I988_9BRAS R0I988_9BRAS R0ETW2_9BRAS R0ETW2_9BRAS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R0IF40_9BRASMADS-box domain-containing protein. (168 aa)    
Predicted Functional Partners:
R0I855_9BRAS
MADS-box domain-containing protein.
    
 
 0.663
R0GEA3_9BRAS
MADS-box domain-containing protein.
    
 
 0.571
R0EZF4_9BRAS
MADS-box domain-containing protein.
    
 
 0.567
R0HKY3_9BRAS
SpoU_methylase domain-containing protein.
      
 0.542
R0I988_9BRAS
MADS-box domain-containing protein.
      
 0.538
R0ETW2_9BRAS
MBD domain-containing protein.
     
 0.494
Your Current Organism:
Capsella rubella
NCBI taxonomy Id: 81985
Other names: C. rubella, Capsella rubella Reut.
Server load: low (26%) [HD]