STRINGSTRING
V4JQ76_EUTSA V4JQ76_EUTSA V4L254_EUTSA V4L254_EUTSA V4KG44_EUTSA V4KG44_EUTSA V4LNC0_EUTSA V4LNC0_EUTSA V4KA51_EUTSA V4KA51_EUTSA V4K8F1_EUTSA V4K8F1_EUTSA V4KJZ5_EUTSA V4KJZ5_EUTSA V4L7V3_EUTSA V4L7V3_EUTSA V4N9E7_EUTSA V4N9E7_EUTSA V4KSC8_EUTSA V4KSC8_EUTSA V4NQJ8_EUTSA V4NQJ8_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4JQ76_EUTSANAC domain-containing protein. (272 aa)    
Predicted Functional Partners:
V4L254_EUTSA
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 0.597
V4KG44_EUTSA
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
  0.564
V4LNC0_EUTSA
Uncharacterized protein.
  
 
  0.547
V4KA51_EUTSA
Phytocyanin domain-containing protein.
  
 
  0.546
V4K8F1_EUTSA
Uncharacterized protein.
  
 
  0.545
V4KJZ5_EUTSA
Uncharacterized protein.
  
 
   0.535
V4L7V3_EUTSA
Uncharacterized protein.
  
 
   0.532
V4N9E7_EUTSA
NAC domain-containing protein.
  
   0.531
V4KSC8_EUTSA
Uncharacterized protein.
  
     0.530
V4NQJ8_EUTSA
Uncharacterized protein.
  
  
  0.530
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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