STRINGSTRING
V4K617_EUTSA V4K617_EUTSA V4MGF3_EUTSA V4MGF3_EUTSA V4KWF3_EUTSA V4KWF3_EUTSA V4M9P3_EUTSA V4M9P3_EUTSA V4MAP8_EUTSA V4MAP8_EUTSA V4N461_EUTSA V4N461_EUTSA V4KDS8_EUTSA V4KDS8_EUTSA V4L751_EUTSA V4L751_EUTSA V4LF92_EUTSA V4LF92_EUTSA V4NJB1_EUTSA V4NJB1_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4K617_EUTSAHTH myb-type domain-containing protein. (433 aa)    
Predicted Functional Partners:
V4MGF3_EUTSA
Uncharacterized protein.
      
 0.596
V4KWF3_EUTSA
Uncharacterized protein.
      
 0.550
V4M9P3_EUTSA
BHLH domain-containing protein.
      
 0.547
V4MAP8_EUTSA
GATA transcription factor; Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. Belongs to the type IV zinc-finger family. Class A subfamily.
      
 0.438
V4N461_EUTSA
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.424
V4KDS8_EUTSA
COBRA-like protein; Belongs to the COBRA family.
      
 0.412
V4L751_EUTSA
Uncharacterized protein.
  
     0.411
V4LF92_EUTSA
Uncharacterized protein.
      
 0.408
V4NJB1_EUTSA
CLP1_P domain-containing protein.
      
 0.408
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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