STRINGSTRING
V4LP40_EUTSA V4LP40_EUTSA V4M7Y6_EUTSA V4M7Y6_EUTSA V4L4B3_EUTSA V4L4B3_EUTSA V4M7L0_EUTSA V4M7L0_EUTSA V4NKD8_EUTSA V4NKD8_EUTSA V4LVQ7_EUTSA V4LVQ7_EUTSA V4KXM2_EUTSA V4KXM2_EUTSA V4MIE5_EUTSA V4MIE5_EUTSA V4KNN3_EUTSA V4KNN3_EUTSA V4KWL5_EUTSA V4KWL5_EUTSA V4JQL3_EUTSA V4JQL3_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LP40_EUTSAGRAS domain-containing protein; Belongs to the GRAS family. (416 aa)    
Predicted Functional Partners:
V4M7Y6_EUTSA
TPR_REGION domain-containing protein.
      
 0.557
V4L4B3_EUTSA
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
      
 0.555
V4M7L0_EUTSA
Uncharacterized protein.
      
 0.552
V4NKD8_EUTSA
ERCC4 domain-containing protein.
      
 0.529
V4LVQ7_EUTSA
Uncharacterized protein.
      
 0.517
V4KXM2_EUTSA
NAC domain-containing protein.
  
     0.507
V4MIE5_EUTSA
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.505
V4KNN3_EUTSA
Uncharacterized protein.
  
     0.503
V4KWL5_EUTSA
Uncharacterized protein.
  
     0.498
V4JQL3_EUTSA
NAC domain-containing protein.
  
     0.496
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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