STRINGSTRING
V4M958_EUTSA V4M958_EUTSA V4LL14_EUTSA V4LL14_EUTSA V4LQB0_EUTSA V4LQB0_EUTSA V4LV04_EUTSA V4LV04_EUTSA V4KH53_EUTSA V4KH53_EUTSA V4L8P5_EUTSA V4L8P5_EUTSA V4KM30_EUTSA V4KM30_EUTSA V4NSF7_EUTSA V4NSF7_EUTSA V4P2R1_EUTSA V4P2R1_EUTSA V4KR87_EUTSA V4KR87_EUTSA V4LXP6_EUTSA V4LXP6_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4M958_EUTSAUncharacterized protein. (389 aa)    
Predicted Functional Partners:
V4LL14_EUTSA
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.771
V4LQB0_EUTSA
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.771
V4LV04_EUTSA
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.771
V4KH53_EUTSA
Uncharacterized protein.
   
 0.769
V4L8P5_EUTSA
Uncharacterized protein.
   
 0.769
V4KM30_EUTSA
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.768
V4NSF7_EUTSA
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.768
V4P2R1_EUTSA
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.768
V4KR87_EUTSA
Ribosomal_L18_c domain-containing protein.
   
 
 0.764
V4LXP6_EUTSA
Ubiquitin-like domain-containing protein.
   
 0.754
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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