STRINGSTRING
V4MHJ8_EUTSA V4MHJ8_EUTSA V4LEL4_EUTSA V4LEL4_EUTSA V4NP12_EUTSA V4NP12_EUTSA V4KRX0_EUTSA V4KRX0_EUTSA V4LFP1_EUTSA V4LFP1_EUTSA V4KZS8_EUTSA V4KZS8_EUTSA V4KZ45_EUTSA V4KZ45_EUTSA V4KWU5_EUTSA V4KWU5_EUTSA V4KFM8_EUTSA V4KFM8_EUTSA V4MA18_EUTSA V4MA18_EUTSA V4LIV1_EUTSA V4LIV1_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4MHJ8_EUTSADof-type domain-containing protein. (172 aa)    
Predicted Functional Partners:
V4LEL4_EUTSA
Homeobox domain-containing protein.
      
 0.554
V4NP12_EUTSA
AP2/ERF domain-containing protein.
  
     0.524
V4KRX0_EUTSA
AP2/ERF domain-containing protein.
  
     0.512
V4LFP1_EUTSA
Uncharacterized protein.
      
 0.505
V4KZS8_EUTSA
AP2/ERF domain-containing protein.
  
     0.502
V4KZ45_EUTSA
Uncharacterized protein.
  
     0.501
V4KWU5_EUTSA
AP2/ERF domain-containing protein.
  
     0.498
V4KFM8_EUTSA
AP2/ERF domain-containing protein.
  
     0.491
V4MA18_EUTSA
AP2/ERF domain-containing protein.
  
     0.491
V4LIV1_EUTSA
AP2/ERF domain-containing protein.
  
     0.488
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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