STRINGSTRING
V4NZJ1_EUTSA V4NZJ1_EUTSA V4JTZ3_EUTSA V4JTZ3_EUTSA V4MA80_EUTSA V4MA80_EUTSA V4N159_EUTSA V4N159_EUTSA V4LPA5_EUTSA V4LPA5_EUTSA V4L9V9_EUTSA V4L9V9_EUTSA V4M7C0_EUTSA V4M7C0_EUTSA V4KU90_EUTSA V4KU90_EUTSA V4M123_EUTSA V4M123_EUTSA V4M4M6_EUTSA V4M4M6_EUTSA V4KNT6_EUTSA V4KNT6_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4NZJ1_EUTSAUncharacterized protein. (366 aa)    
Predicted Functional Partners:
V4JTZ3_EUTSA
LOB domain-containing protein.
    
 
 0.884
V4MA80_EUTSA
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
   
  
 0.599
V4N159_EUTSA
Uncharacterized protein.
      
 0.595
V4LPA5_EUTSA
Uncharacterized protein.
    
 
 0.594
V4L9V9_EUTSA
Uncharacterized protein.
      
 0.593
V4M7C0_EUTSA
J domain-containing protein.
      
 0.582
V4KU90_EUTSA
SANT domain-containing protein.
      
 0.580
V4M123_EUTSA
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.569
V4M4M6_EUTSA
Uncharacterized protein.
      
 0.567
V4KNT6_EUTSA
LOB domain-containing protein.
    
 
 0.565
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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