STRINGSTRING
V4MGA3_EUTSA V4MGA3_EUTSA V4LDB6_EUTSA V4LDB6_EUTSA V4L3A5_EUTSA V4L3A5_EUTSA V4KN23_EUTSA V4KN23_EUTSA V4MS88_EUTSA V4MS88_EUTSA V4LR30_EUTSA V4LR30_EUTSA V4LRZ0_EUTSA V4LRZ0_EUTSA V4L579_EUTSA V4L579_EUTSA V4KB08_EUTSA V4KB08_EUTSA V4KK99_EUTSA V4KK99_EUTSA V4MRD7_EUTSA V4MRD7_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4MGA3_EUTSAAP2/ERF domain-containing protein. (293 aa)    
Predicted Functional Partners:
V4LDB6_EUTSA
Dof-type domain-containing protein.
  
   
 0.637
V4L3A5_EUTSA
AP2/ERF domain-containing protein.
  
   
 0.613
V4KN23_EUTSA
Dof-type domain-containing protein.
  
   
 0.562
V4MS88_EUTSA
Dof-type domain-containing protein.
  
    0.549
V4LR30_EUTSA
Dof-type domain-containing protein.
  
     0.536
V4LRZ0_EUTSA
Dof-type domain-containing protein.
  
     0.535
V4L579_EUTSA
Dof-type domain-containing protein.
  
     0.534
V4KB08_EUTSA
Dof-type domain-containing protein.
  
     0.531
V4KK99_EUTSA
Dof-type domain-containing protein.
  
     0.529
V4MRD7_EUTSA
Dof-type domain-containing protein.
  
     0.528
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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