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V4KIA1_EUTSA V4KIA1_EUTSA V4LY58_EUTSA V4LY58_EUTSA V4KML1_EUTSA V4KML1_EUTSA V4LG65_EUTSA V4LG65_EUTSA V4KVX2_EUTSA V4KVX2_EUTSA V4LEB6_EUTSA V4LEB6_EUTSA V4M9D5_EUTSA V4M9D5_EUTSA V4KBQ0_EUTSA V4KBQ0_EUTSA V4KXZ2_EUTSA V4KXZ2_EUTSA V4MAW6_EUTSA V4MAW6_EUTSA V4LFZ2_EUTSA V4LFZ2_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4KIA1_EUTSAC2H2-type domain-containing protein. (312 aa)    
Predicted Functional Partners:
V4LY58_EUTSA
Brix domain-containing protein.
   
 
 0.684
V4KML1_EUTSA
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
   0.658
V4LG65_EUTSA
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.548
V4KVX2_EUTSA
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.508
V4LEB6_EUTSA
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.498
V4M9D5_EUTSA
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.498
V4KBQ0_EUTSA
Nop domain-containing protein.
   
   0.483
V4KXZ2_EUTSA
Nop domain-containing protein.
   
   0.483
V4MAW6_EUTSA
Nop domain-containing protein.
   
   0.483
V4LFZ2_EUTSA
FtsJ domain-containing protein.
   
   0.479
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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