STRINGSTRING
V4S9K7_9ROSI V4S9K7_9ROSI V4U7I5_9ROSI V4U7I5_9ROSI V4TMV0_9ROSI V4TMV0_9ROSI V4TSZ0_9ROSI V4TSZ0_9ROSI V4V349_9ROSI V4V349_9ROSI V4T218_9ROSI V4T218_9ROSI V4SBI2_9ROSI V4SBI2_9ROSI V4SN66_9ROSI V4SN66_9ROSI V4UG77_9ROSI V4UG77_9ROSI V4SGW3_9ROSI V4SGW3_9ROSI V4SW39_9ROSI V4SW39_9ROSI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4S9K7_9ROSINAC domain-containing protein. (344 aa)    
Predicted Functional Partners:
V4U7I5_9ROSI
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.516
V4TMV0_9ROSI
Amb_all domain-containing protein.
  
     0.505
V4TSZ0_9ROSI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.474
V4V349_9ROSI
Uncharacterized protein.
  
     0.470
V4T218_9ROSI
Uncharacterized protein.
  
     0.469
V4SBI2_9ROSI
Auxin_resp domain-containing protein.
  
 
   0.461
V4SN66_9ROSI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.459
V4UG77_9ROSI
Myb-like domain-containing protein.
  
 
   0.455
V4SGW3_9ROSI
Uncharacterized protein.
  
     0.448
V4SW39_9ROSI
Exonuclease domain-containing protein.
      
 0.443
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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