Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4S9K7_9ROSI | V4SBI2_9ROSI | V4S9K7 | V4SBI2 | NAC domain-containing protein. | Auxin_resp domain-containing protein. | 0.461 |
V4S9K7_9ROSI | V4SGW3_9ROSI | V4S9K7 | V4SGW3 | NAC domain-containing protein. | Uncharacterized protein. | 0.448 |
V4S9K7_9ROSI | V4SN66_9ROSI | V4S9K7 | V4SN66 | NAC domain-containing protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.459 |
V4S9K7_9ROSI | V4SW39_9ROSI | V4S9K7 | V4SW39 | NAC domain-containing protein. | Exonuclease domain-containing protein. | 0.443 |
V4S9K7_9ROSI | V4T218_9ROSI | V4S9K7 | V4T218 | NAC domain-containing protein. | Uncharacterized protein. | 0.469 |
V4S9K7_9ROSI | V4TMV0_9ROSI | V4S9K7 | V4TMV0 | NAC domain-containing protein. | Amb_all domain-containing protein. | 0.505 |
V4S9K7_9ROSI | V4TSZ0_9ROSI | V4S9K7 | V4TSZ0 | NAC domain-containing protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.474 |
V4S9K7_9ROSI | V4U7I5_9ROSI | V4S9K7 | V4U7I5 | NAC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.516 |
V4S9K7_9ROSI | V4UG77_9ROSI | V4S9K7 | V4UG77 | NAC domain-containing protein. | Myb-like domain-containing protein. | 0.455 |
V4S9K7_9ROSI | V4V349_9ROSI | V4S9K7 | V4V349 | NAC domain-containing protein. | Uncharacterized protein. | 0.470 |
V4SBI2_9ROSI | V4S9K7_9ROSI | V4SBI2 | V4S9K7 | Auxin_resp domain-containing protein. | NAC domain-containing protein. | 0.461 |
V4SBI2_9ROSI | V4SN66_9ROSI | V4SBI2 | V4SN66 | Auxin_resp domain-containing protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.481 |
V4SBI2_9ROSI | V4TMV0_9ROSI | V4SBI2 | V4TMV0 | Auxin_resp domain-containing protein. | Amb_all domain-containing protein. | 0.425 |
V4SBI2_9ROSI | V4TSZ0_9ROSI | V4SBI2 | V4TSZ0 | Auxin_resp domain-containing protein. | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | 0.445 |
V4SBI2_9ROSI | V4UG77_9ROSI | V4SBI2 | V4UG77 | Auxin_resp domain-containing protein. | Myb-like domain-containing protein. | 0.474 |
V4SBI2_9ROSI | V4V349_9ROSI | V4SBI2 | V4V349 | Auxin_resp domain-containing protein. | Uncharacterized protein. | 0.483 |
V4SGW3_9ROSI | V4S9K7_9ROSI | V4SGW3 | V4S9K7 | Uncharacterized protein. | NAC domain-containing protein. | 0.448 |
V4SGW3_9ROSI | V4T218_9ROSI | V4SGW3 | V4T218 | Uncharacterized protein. | Uncharacterized protein. | 0.405 |
V4SN66_9ROSI | V4S9K7_9ROSI | V4SN66 | V4S9K7 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | NAC domain-containing protein. | 0.459 |
V4SN66_9ROSI | V4SBI2_9ROSI | V4SN66 | V4SBI2 | Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. | Auxin_resp domain-containing protein. | 0.481 |
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