Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SPEAR2 | V4SJT6_9ROSI | V4UR78 | V4SJT6 | SPOROCYTELESS-like EAR-containing protein 2. | TF-B3 domain-containing protein. | 0.482 |
SPEAR2 | V4TKL8_9ROSI | V4UR78 | V4TKL8 | SPOROCYTELESS-like EAR-containing protein 2. | Uncharacterized protein. | 0.508 |
SPEAR2 | V4UJM9_9ROSI | V4UR78 | V4UJM9 | SPOROCYTELESS-like EAR-containing protein 2. | RING-type domain-containing protein. | 0.448 |
V4S164_9ROSI | V4SJT6_9ROSI | V4S164 | V4SJT6 | Protein kinase domain-containing protein. | TF-B3 domain-containing protein. | 0.473 |
V4S2G9_9ROSI | V4SJT6_9ROSI | V4S2G9 | V4SJT6 | Uncharacterized protein. | TF-B3 domain-containing protein. | 0.591 |
V4SFJ5_9ROSI | V4SJT6_9ROSI | V4SFJ5 | V4SJT6 | F-box domain-containing protein. | TF-B3 domain-containing protein. | 0.454 |
V4SFJ5_9ROSI | V4T8Y7_9ROSI | V4SFJ5 | V4T8Y7 | F-box domain-containing protein. | NAC domain-containing protein. | 0.496 |
V4SFJ5_9ROSI | V4UJM9_9ROSI | V4SFJ5 | V4UJM9 | F-box domain-containing protein. | RING-type domain-containing protein. | 0.500 |
V4SJT6_9ROSI | SPEAR2 | V4SJT6 | V4UR78 | TF-B3 domain-containing protein. | SPOROCYTELESS-like EAR-containing protein 2. | 0.482 |
V4SJT6_9ROSI | V4S164_9ROSI | V4SJT6 | V4S164 | TF-B3 domain-containing protein. | Protein kinase domain-containing protein. | 0.473 |
V4SJT6_9ROSI | V4S2G9_9ROSI | V4SJT6 | V4S2G9 | TF-B3 domain-containing protein. | Uncharacterized protein. | 0.591 |
V4SJT6_9ROSI | V4SFJ5_9ROSI | V4SJT6 | V4SFJ5 | TF-B3 domain-containing protein. | F-box domain-containing protein. | 0.454 |
V4SJT6_9ROSI | V4SV79_9ROSI | V4SJT6 | V4SV79 | TF-B3 domain-containing protein. | Protein kinase domain-containing protein. | 0.473 |
V4SJT6_9ROSI | V4T8Y7_9ROSI | V4SJT6 | V4T8Y7 | TF-B3 domain-containing protein. | NAC domain-containing protein. | 0.460 |
V4SJT6_9ROSI | V4TKL8_9ROSI | V4SJT6 | V4TKL8 | TF-B3 domain-containing protein. | Uncharacterized protein. | 0.493 |
V4SJT6_9ROSI | V4UJK4_9ROSI | V4SJT6 | V4UJK4 | TF-B3 domain-containing protein. | Uncharacterized protein. | 0.472 |
V4SJT6_9ROSI | V4UJM9_9ROSI | V4SJT6 | V4UJM9 | TF-B3 domain-containing protein. | RING-type domain-containing protein. | 0.471 |
V4SJT6_9ROSI | V4UQ48_9ROSI | V4SJT6 | V4UQ48 | TF-B3 domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.458 |
V4SV79_9ROSI | V4SJT6_9ROSI | V4SV79 | V4SJT6 | Protein kinase domain-containing protein. | TF-B3 domain-containing protein. | 0.473 |
V4T8Y7_9ROSI | V4SFJ5_9ROSI | V4T8Y7 | V4SFJ5 | NAC domain-containing protein. | F-box domain-containing protein. | 0.496 |
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