STRINGSTRING
V4UV56_9ROSI V4UV56_9ROSI V4SYP5_9ROSI V4SYP5_9ROSI V4SY62_9ROSI V4SY62_9ROSI V4UHF9_9ROSI V4UHF9_9ROSI V4UKD8_9ROSI V4UKD8_9ROSI V4U0V1_9ROSI V4U0V1_9ROSI V4UFH2_9ROSI V4UFH2_9ROSI V4UN54_9ROSI V4UN54_9ROSI V4UKW4_9ROSI V4UKW4_9ROSI V4U2U3_9ROSI V4U2U3_9ROSI V4TKT0_9ROSI V4TKT0_9ROSI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4UV56_9ROSIUncharacterized protein. (592 aa)    
Predicted Functional Partners:
V4SYP5_9ROSI
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
      
 0.635
V4SY62_9ROSI
LOB domain-containing protein.
   
  
 0.516
V4UHF9_9ROSI
LOB domain-containing protein.
   
  
 0.516
V4UKD8_9ROSI
Uncharacterized protein.
  
     0.502
V4U0V1_9ROSI
Uncharacterized protein.
  
     0.491
V4UFH2_9ROSI
Uncharacterized protein.
  
     0.485
V4UN54_9ROSI
SWIM-type domain-containing protein.
  
     0.484
V4UKW4_9ROSI
AP2/ERF domain-containing protein.
   
 
 0.473
V4U2U3_9ROSI
Uncharacterized protein.
  
     0.470
V4TKT0_9ROSI
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.463
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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