Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4RZ92_9ROSI | V4TCG1_9ROSI | V4RZ92 | V4TCG1 | Uncharacterized protein. | Uncharacterized protein. | 0.498 |
V4RZ92_9ROSI | V4TTS0_9ROSI | V4RZ92 | V4TTS0 | Uncharacterized protein. | Uncharacterized protein. | 0.508 |
V4RZ92_9ROSI | V4U345_9ROSI | V4RZ92 | V4U345 | Uncharacterized protein. | NAC domain-containing protein. | 0.510 |
V4RZ92_9ROSI | V4U7I5_9ROSI | V4RZ92 | V4U7I5 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.426 |
V4RZ92_9ROSI | V4UIG3_9ROSI | V4RZ92 | V4UIG3 | Uncharacterized protein. | Uncharacterized protein. | 0.490 |
V4RZ92_9ROSI | V4UTX3_9ROSI | V4RZ92 | V4UTX3 | Uncharacterized protein. | Uncharacterized protein. | 0.483 |
V4SKD9_9ROSI | V4TCG1_9ROSI | V4SKD9 | V4TCG1 | LOB domain-containing protein. | Uncharacterized protein. | 0.458 |
V4SKD9_9ROSI | V4U345_9ROSI | V4SKD9 | V4U345 | LOB domain-containing protein. | NAC domain-containing protein. | 0.474 |
V4SKD9_9ROSI | V4U4W7_9ROSI | V4SKD9 | V4U4W7 | LOB domain-containing protein. | OBERON-like protein; Probable transcription factor. | 0.460 |
V4SKD9_9ROSI | V4U7I5_9ROSI | V4SKD9 | V4U7I5 | LOB domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.424 |
V4SKD9_9ROSI | V4UIG3_9ROSI | V4SKD9 | V4UIG3 | LOB domain-containing protein. | Uncharacterized protein. | 0.422 |
V4T2E5_9ROSI | V4TCG1_9ROSI | V4T2E5 | V4TCG1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.402 |
V4T2E5_9ROSI | V4U345_9ROSI | V4T2E5 | V4U345 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC domain-containing protein. | 0.497 |
V4T2E5_9ROSI | V4U4W7_9ROSI | V4T2E5 | V4U4W7 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | OBERON-like protein; Probable transcription factor. | 0.402 |
V4T2E5_9ROSI | V4UIG3_9ROSI | V4T2E5 | V4UIG3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.412 |
V4TCG1_9ROSI | V4RZ92_9ROSI | V4TCG1 | V4RZ92 | Uncharacterized protein. | Uncharacterized protein. | 0.498 |
V4TCG1_9ROSI | V4SKD9_9ROSI | V4TCG1 | V4SKD9 | Uncharacterized protein. | LOB domain-containing protein. | 0.458 |
V4TCG1_9ROSI | V4T2E5_9ROSI | V4TCG1 | V4T2E5 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.402 |
V4TCG1_9ROSI | V4TTS0_9ROSI | V4TCG1 | V4TTS0 | Uncharacterized protein. | Uncharacterized protein. | 0.508 |
V4TCG1_9ROSI | V4U345_9ROSI | V4TCG1 | V4U345 | Uncharacterized protein. | NAC domain-containing protein. | 0.502 |
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