STRINGSTRING
V4UFY1_9ROSI V4UFY1_9ROSI V4TNZ9_9ROSI V4TNZ9_9ROSI V4U7I5_9ROSI V4U7I5_9ROSI V4SKD9_9ROSI V4SKD9_9ROSI V4UNZ6_9ROSI V4UNZ6_9ROSI V4WEK3_9ROSI V4WEK3_9ROSI V4UPG6_9ROSI V4UPG6_9ROSI V4U7B6_9ROSI V4U7B6_9ROSI V4SDX3_9ROSI V4SDX3_9ROSI V4UKI4_9ROSI V4UKI4_9ROSI V4T778_9ROSI V4T778_9ROSI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4UFY1_9ROSINAC domain-containing protein. (384 aa)    
Predicted Functional Partners:
V4TNZ9_9ROSI
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.570
V4U7I5_9ROSI
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.565
V4SKD9_9ROSI
LOB domain-containing protein.
  
   
 0.558
V4UNZ6_9ROSI
GRAS domain-containing protein; Belongs to the GRAS family.
  
   
 0.558
V4WEK3_9ROSI
TCP domain-containing protein.
    
 
 0.523
V4UPG6_9ROSI
Uncharacterized protein.
  
  
  0.518
V4U7B6_9ROSI
Uncharacterized protein.
  
   
 0.513
V4SDX3_9ROSI
Uncharacterized protein.
  
     0.507
V4UKI4_9ROSI
XET_C domain-containing protein.
  
  
  0.496
V4T778_9ROSI
PlsC domain-containing protein.
  
     0.495
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
Server load: low (18%) [HD]