Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4SDX3_9ROSI | V4T778_9ROSI | V4SDX3 | V4T778 | Uncharacterized protein. | PlsC domain-containing protein. | 0.474 |
V4SDX3_9ROSI | V4U7B6_9ROSI | V4SDX3 | V4U7B6 | Uncharacterized protein. | Uncharacterized protein. | 0.490 |
V4SDX3_9ROSI | V4U7I5_9ROSI | V4SDX3 | V4U7I5 | Uncharacterized protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.456 |
V4SDX3_9ROSI | V4UFY1_9ROSI | V4SDX3 | V4UFY1 | Uncharacterized protein. | NAC domain-containing protein. | 0.507 |
V4SDX3_9ROSI | V4UKI4_9ROSI | V4SDX3 | V4UKI4 | Uncharacterized protein. | XET_C domain-containing protein. | 0.527 |
V4SDX3_9ROSI | V4UPG6_9ROSI | V4SDX3 | V4UPG6 | Uncharacterized protein. | Uncharacterized protein. | 0.467 |
V4SKD9_9ROSI | V4U7I5_9ROSI | V4SKD9 | V4U7I5 | LOB domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.424 |
V4SKD9_9ROSI | V4UFY1_9ROSI | V4SKD9 | V4UFY1 | LOB domain-containing protein. | NAC domain-containing protein. | 0.558 |
V4SKD9_9ROSI | V4UKI4_9ROSI | V4SKD9 | V4UKI4 | LOB domain-containing protein. | XET_C domain-containing protein. | 0.401 |
V4T778_9ROSI | V4SDX3_9ROSI | V4T778 | V4SDX3 | PlsC domain-containing protein. | Uncharacterized protein. | 0.474 |
V4T778_9ROSI | V4TNZ9_9ROSI | V4T778 | V4TNZ9 | PlsC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.494 |
V4T778_9ROSI | V4U7I5_9ROSI | V4T778 | V4U7I5 | PlsC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.445 |
V4T778_9ROSI | V4UFY1_9ROSI | V4T778 | V4UFY1 | PlsC domain-containing protein. | NAC domain-containing protein. | 0.495 |
V4T778_9ROSI | V4UKI4_9ROSI | V4T778 | V4UKI4 | PlsC domain-containing protein. | XET_C domain-containing protein. | 0.531 |
V4T778_9ROSI | V4UPG6_9ROSI | V4T778 | V4UPG6 | PlsC domain-containing protein. | Uncharacterized protein. | 0.532 |
V4TNZ9_9ROSI | V4T778_9ROSI | V4TNZ9 | V4T778 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | PlsC domain-containing protein. | 0.494 |
V4TNZ9_9ROSI | V4UFY1_9ROSI | V4TNZ9 | V4UFY1 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | NAC domain-containing protein. | 0.570 |
V4TNZ9_9ROSI | V4UKI4_9ROSI | V4TNZ9 | V4UKI4 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | XET_C domain-containing protein. | 0.554 |
V4TNZ9_9ROSI | V4UPG6_9ROSI | V4TNZ9 | V4UPG6 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Uncharacterized protein. | 0.507 |
V4TNZ9_9ROSI | V4WEK3_9ROSI | V4TNZ9 | V4WEK3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | TCP domain-containing protein. | 0.470 |
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