Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A067EEC4 | A0A067EX66 | NAC domain-containing protein. | TCP domain-containing protein. | 0.540 |
A0A067EEC4 | A0A067FB08 | NAC domain-containing protein. | Uncharacterized protein. | 0.508 |
A0A067EEC4 | A0A067FF41 | NAC domain-containing protein. | HTH myb-type domain-containing protein. | 0.509 |
A0A067EEC4 | A0A067FJQ5 | NAC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.560 |
A0A067EEC4 | A0A067FYE6 | NAC domain-containing protein. | Uncharacterized protein. | 0.513 |
A0A067EEC4 | A0A067G9R0 | NAC domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.572 |
A0A067EEC4 | A0A067GDM8 | NAC domain-containing protein. | Uncharacterized protein. | 0.519 |
A0A067EEC4 | A0A067GEP9 | NAC domain-containing protein. | GRAS domain-containing protein; Belongs to the GRAS family. | 0.582 |
A0A067EEC4 | A0A067GGX2 | NAC domain-containing protein. | LOB domain-containing protein. | 0.564 |
A0A067EEC4 | A0A067GQX7 | NAC domain-containing protein. | Uncharacterized protein. | 0.513 |
A0A067EX66 | A0A067EEC4 | TCP domain-containing protein. | NAC domain-containing protein. | 0.540 |
A0A067EX66 | A0A067G9R0 | TCP domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.490 |
A0A067FB08 | A0A067EEC4 | Uncharacterized protein. | NAC domain-containing protein. | 0.508 |
A0A067FB08 | A0A067FYE6 | Uncharacterized protein. | Uncharacterized protein. | 0.487 |
A0A067FF41 | A0A067EEC4 | HTH myb-type domain-containing protein. | NAC domain-containing protein. | 0.509 |
A0A067FF41 | A0A067FJQ5 | HTH myb-type domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.511 |
A0A067FF41 | A0A067FYE6 | HTH myb-type domain-containing protein. | Uncharacterized protein. | 0.443 |
A0A067FF41 | A0A067G9R0 | HTH myb-type domain-containing protein. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.530 |
A0A067FF41 | A0A067GDM8 | HTH myb-type domain-containing protein. | Uncharacterized protein. | 0.484 |
A0A067FF41 | A0A067GQX7 | HTH myb-type domain-containing protein. | Uncharacterized protein. | 0.453 |
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