A0A067F6V7 protein (Citrus sinensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A067F6V7

Uncharacterized protein. (305 aa)

Predicted Functional Partners:

A0A067D9X6

0.448

A0A067EPK3

0.434

A0A067GHP7

0.434

A0A067E8Q6

0.433

A0A067G237

0.431

A0A067GNT5

0.423

A0A067DF61

0.422

A0A067DR43

0.418

A0A067GAB2

0.417

A0A067FR27

0.407

Your Current Organism:

Citrus sinensis

NCBI taxonomy Id: 2711
Other names: Citrus sinensis (L.) Osbeck, Citrus x sinensis, Valencia orange, apfelsine, naranja, navel orange, sweet orange

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067D9X6	A0A067DF61	Uncharacterized protein.	Uncharacterized protein.	0.536
A0A067D9X6	A0A067DR43	Uncharacterized protein.	Uncharacterized protein.	0.537
A0A067D9X6	A0A067E8Q6	Uncharacterized protein.	START domain-containing protein.	0.532
A0A067D9X6	A0A067EPK3	Uncharacterized protein.	Uncharacterized protein.	0.538
A0A067D9X6	A0A067F6V7	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A067D9X6	A0A067FR27	Uncharacterized protein.	Uncharacterized protein.	0.476
A0A067D9X6	A0A067G237	Uncharacterized protein.	Uncharacterized protein.	0.538
A0A067D9X6	A0A067GAB2	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A067D9X6	A0A067GHP7	Uncharacterized protein.	PEROXIDASE_4 domain-containing protein.	0.540
A0A067D9X6	A0A067GNT5	Uncharacterized protein.	Uncharacterized protein.	0.539
A0A067DF61	A0A067D9X6	Uncharacterized protein.	Uncharacterized protein.	0.536
A0A067DF61	A0A067DR43	Uncharacterized protein.	Uncharacterized protein.	0.543
A0A067DF61	A0A067E8Q6	Uncharacterized protein.	START domain-containing protein.	0.525
A0A067DF61	A0A067EPK3	Uncharacterized protein.	Uncharacterized protein.	0.543
A0A067DF61	A0A067F6V7	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A067DF61	A0A067G237	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A067DF61	A0A067GAB2	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A067DF61	A0A067GHP7	Uncharacterized protein.	PEROXIDASE_4 domain-containing protein.	0.529
A0A067DF61	A0A067GNT5	Uncharacterized protein.	Uncharacterized protein.	0.543
A0A067DR43	A0A067D9X6	Uncharacterized protein.	Uncharacterized protein.	0.537